Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.36■□□□□ 0.85
Smcr8Q3UMB5 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.36■□□□□ 0.85
Smcr8Q3UMB5 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Smcr8Q3UMB5 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smcr8Q3UMB5 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Smcr8Q3UMB5 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Smcr8Q3UMB5 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.36■□□□□ 0.85
Smcr8Q3UMB5 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smcr8Q3UMB5 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smcr8Q3UMB5 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smcr8Q3UMB5 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.35■□□□□ 0.85
Smcr8Q3UMB5 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smcr8Q3UMB5 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.35■□□□□ 0.85
Smcr8Q3UMB5 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smcr8Q3UMB5 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smcr8Q3UMB5 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smcr8Q3UMB5 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Smcr8Q3UMB5 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smcr8Q3UMB5 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smcr8Q3UMB5 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smcr8Q3UMB5 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smcr8Q3UMB5 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smcr8Q3UMB5 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.34■□□□□ 0.85
Smcr8Q3UMB5 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
Smcr8Q3UMB5 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.34■□□□□ 0.85
Smcr8Q3UMB5 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Smcr8Q3UMB5 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Smcr8Q3UMB5 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.34■□□□□ 0.85
Smcr8Q3UMB5 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smcr8Q3UMB5 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smcr8Q3UMB5 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smcr8Q3UMB5 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smcr8Q3UMB5 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smcr8Q3UMB5 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smcr8Q3UMB5 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.33■□□□□ 0.85
Smcr8Q3UMB5 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
Smcr8Q3UMB5 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.33■□□□□ 0.85
Smcr8Q3UMB5 Gm12441-201ENSMUST00000121806 588 ntBASIC20.33■□□□□ 0.85
Smcr8Q3UMB5 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smcr8Q3UMB5 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Smcr8Q3UMB5 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Smcr8Q3UMB5 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Smcr8Q3UMB5 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Smcr8Q3UMB5 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.32■□□□□ 0.84
Smcr8Q3UMB5 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smcr8Q3UMB5 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smcr8Q3UMB5 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Smcr8Q3UMB5 Gm7290-201ENSMUST00000104990 617 ntBASIC20.32■□□□□ 0.84
Smcr8Q3UMB5 Gm12918-201ENSMUST00000120234 636 ntBASIC20.32■□□□□ 0.84
Smcr8Q3UMB5 Gm15710-201ENSMUST00000121821 636 ntBASIC20.32■□□□□ 0.84
Smcr8Q3UMB5 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Smcr8Q3UMB5 Gm5075-201ENSMUST00000196916 622 ntBASIC20.32■□□□□ 0.84
Smcr8Q3UMB5 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Smcr8Q3UMB5 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.32■□□□□ 0.84
Smcr8Q3UMB5 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.32■□□□□ 0.84
Smcr8Q3UMB5 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.32■□□□□ 0.84
Smcr8Q3UMB5 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smcr8Q3UMB5 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Smcr8Q3UMB5 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smcr8Q3UMB5 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.32■□□□□ 0.84
Smcr8Q3UMB5 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smcr8Q3UMB5 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smcr8Q3UMB5 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smcr8Q3UMB5 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smcr8Q3UMB5 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Smcr8Q3UMB5 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Smcr8Q3UMB5 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smcr8Q3UMB5 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
Smcr8Q3UMB5 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.31■□□□□ 0.84
Smcr8Q3UMB5 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.31■□□□□ 0.84
Smcr8Q3UMB5 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.31■□□□□ 0.84
Smcr8Q3UMB5 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.31■□□□□ 0.84
Smcr8Q3UMB5 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.31■□□□□ 0.84
Smcr8Q3UMB5 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smcr8Q3UMB5 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smcr8Q3UMB5 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smcr8Q3UMB5 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Smcr8Q3UMB5 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smcr8Q3UMB5 Gm13148-201ENSMUST00000118892 745 ntBASIC20.3■□□□□ 0.84
Smcr8Q3UMB5 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
Smcr8Q3UMB5 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smcr8Q3UMB5 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.3■□□□□ 0.84
Smcr8Q3UMB5 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Smcr8Q3UMB5 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smcr8Q3UMB5 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smcr8Q3UMB5 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smcr8Q3UMB5 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smcr8Q3UMB5 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smcr8Q3UMB5 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smcr8Q3UMB5 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smcr8Q3UMB5 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.29■□□□□ 0.84
Smcr8Q3UMB5 Gm4968-201ENSMUST00000071458 858 ntBASIC20.29■□□□□ 0.84
Smcr8Q3UMB5 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smcr8Q3UMB5 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smcr8Q3UMB5 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smcr8Q3UMB5 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smcr8Q3UMB5 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.29■□□□□ 0.84
Smcr8Q3UMB5 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Smcr8Q3UMB5 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smcr8Q3UMB5 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms