Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Khdc4Q3TCX3 Golph3-202ENSMUST00000226517 2359 ntBASIC18.02■□□□□ 0.47
Khdc4Q3TCX3 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Khdc4Q3TCX3 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Khdc4Q3TCX3 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Khdc4Q3TCX3 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Khdc4Q3TCX3 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Khdc4Q3TCX3 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Khdc4Q3TCX3 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.01■□□□□ 0.47
Khdc4Q3TCX3 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Khdc4Q3TCX3 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Khdc4Q3TCX3 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.01■□□□□ 0.47
Khdc4Q3TCX3 Gm12933-201ENSMUST00000120203 872 ntBASIC18.01■□□□□ 0.47
Khdc4Q3TCX3 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Khdc4Q3TCX3 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Khdc4Q3TCX3 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Khdc4Q3TCX3 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Khdc4Q3TCX3 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Khdc4Q3TCX3 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Khdc4Q3TCX3 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.01■□□□□ 0.47
Khdc4Q3TCX3 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Khdc4Q3TCX3 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18■□□□□ 0.47
Khdc4Q3TCX3 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18■□□□□ 0.47
Khdc4Q3TCX3 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Khdc4Q3TCX3 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18■□□□□ 0.47
Khdc4Q3TCX3 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18■□□□□ 0.47
Khdc4Q3TCX3 Gm10616-201ENSMUST00000205285 2127 ntBASIC18■□□□□ 0.47
Khdc4Q3TCX3 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18■□□□□ 0.47
Khdc4Q3TCX3 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18■□□□□ 0.47
Khdc4Q3TCX3 Ap3s1-204ENSMUST00000225520 957 ntBASIC18■□□□□ 0.47
Khdc4Q3TCX3 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Khdc4Q3TCX3 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Khdc4Q3TCX3 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Khdc4Q3TCX3 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18■□□□□ 0.47
Khdc4Q3TCX3 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Khdc4Q3TCX3 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Khdc4Q3TCX3 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Khdc4Q3TCX3 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Khdc4Q3TCX3 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.99■□□□□ 0.47
Khdc4Q3TCX3 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Khdc4Q3TCX3 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Khdc4Q3TCX3 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Khdc4Q3TCX3 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Khdc4Q3TCX3 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Khdc4Q3TCX3 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Khdc4Q3TCX3 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Khdc4Q3TCX3 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.99■□□□□ 0.47
Khdc4Q3TCX3 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.99■□□□□ 0.47
Khdc4Q3TCX3 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.99■□□□□ 0.47
Khdc4Q3TCX3 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Khdc4Q3TCX3 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Khdc4Q3TCX3 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Khdc4Q3TCX3 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Khdc4Q3TCX3 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
Khdc4Q3TCX3 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
Khdc4Q3TCX3 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Khdc4Q3TCX3 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Khdc4Q3TCX3 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.98■□□□□ 0.47
Khdc4Q3TCX3 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Khdc4Q3TCX3 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Khdc4Q3TCX3 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Khdc4Q3TCX3 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
Khdc4Q3TCX3 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Khdc4Q3TCX3 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Khdc4Q3TCX3 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Khdc4Q3TCX3 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Khdc4Q3TCX3 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Khdc4Q3TCX3 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.97■□□□□ 0.47
Khdc4Q3TCX3 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.97■□□□□ 0.47
Khdc4Q3TCX3 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Khdc4Q3TCX3 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
Khdc4Q3TCX3 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Khdc4Q3TCX3 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Khdc4Q3TCX3 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Khdc4Q3TCX3 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Khdc4Q3TCX3 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Khdc4Q3TCX3 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Khdc4Q3TCX3 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Khdc4Q3TCX3 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Khdc4Q3TCX3 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.96■□□□□ 0.47
Khdc4Q3TCX3 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.96■□□□□ 0.47
Khdc4Q3TCX3 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.96■□□□□ 0.47
Khdc4Q3TCX3 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Khdc4Q3TCX3 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Khdc4Q3TCX3 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Khdc4Q3TCX3 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Khdc4Q3TCX3 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Khdc4Q3TCX3 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Khdc4Q3TCX3 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Khdc4Q3TCX3 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Khdc4Q3TCX3 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Khdc4Q3TCX3 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Khdc4Q3TCX3 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.95■□□□□ 0.46
Khdc4Q3TCX3 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Khdc4Q3TCX3 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Khdc4Q3TCX3 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Khdc4Q3TCX3 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.95■□□□□ 0.46
Khdc4Q3TCX3 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Khdc4Q3TCX3 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Khdc4Q3TCX3 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms