Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ush2AQ2QI47 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Ush2AQ2QI47 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC10.34□□□□□ -0.75
Ush2AQ2QI47 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ush2AQ2QI47 AC134329.2-201ENSMUST00000217897 428 ntBASIC10.34□□□□□ -0.75
Ush2AQ2QI47 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ush2AQ2QI47 Gm8258-201ENSMUST00000055593 1449 ntBASIC10.34□□□□□ -0.75
Ush2AQ2QI47 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Ush2AQ2QI47 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ush2AQ2QI47 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC10.34□□□□□ -0.75
Ush2AQ2QI47 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ush2AQ2QI47 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ush2AQ2QI47 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC10.33□□□□□ -0.76
Ush2AQ2QI47 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ush2AQ2QI47 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC10.33□□□□□ -0.76
Ush2AQ2QI47 H3f3aos-201ENSMUST00000097448 2905 ntBASIC10.33□□□□□ -0.76
Ush2AQ2QI47 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ush2AQ2QI47 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC10.33□□□□□ -0.76
Ush2AQ2QI47 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ush2AQ2QI47 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC10.33□□□□□ -0.76
Ush2AQ2QI47 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ush2AQ2QI47 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ush2AQ2QI47 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC10.33□□□□□ -0.76
Ush2AQ2QI47 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ush2AQ2QI47 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ush2AQ2QI47 Mir6236-201ENSMUST00000184437 123 ntBASIC10.32□□□□□ -0.76
Ush2AQ2QI47 Gm45058-201ENSMUST00000205810 766 ntBASIC10.32□□□□□ -0.76
Ush2AQ2QI47 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC10.32□□□□□ -0.76
Ush2AQ2QI47 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ush2AQ2QI47 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Ush2AQ2QI47 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ush2AQ2QI47 Gm27704-201ENSMUST00000185094 107 ntBASIC10.32□□□□□ -0.76
Ush2AQ2QI47 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ush2AQ2QI47 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC10.32□□□□□ -0.76
Ush2AQ2QI47 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ush2AQ2QI47 Timm23-208ENSMUST00000226683 750 ntBASIC10.32□□□□□ -0.76
Ush2AQ2QI47 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ush2AQ2QI47 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Ush2AQ2QI47 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ush2AQ2QI47 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Ush2AQ2QI47 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ush2AQ2QI47 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ush2AQ2QI47 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ush2AQ2QI47 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ush2AQ2QI47 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ush2AQ2QI47 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ush2AQ2QI47 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ush2AQ2QI47 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC10.31□□□□□ -0.76
Ush2AQ2QI47 Wnt10b-205ENSMUST00000226846 1204 ntBASIC10.31□□□□□ -0.76
Ush2AQ2QI47 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ush2AQ2QI47 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ush2AQ2QI47 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Ush2AQ2QI47 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC10.31□□□□□ -0.76
Ush2AQ2QI47 Gm12382-201ENSMUST00000122005 922 ntBASIC10.31□□□□□ -0.76
Ush2AQ2QI47 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.76
Ush2AQ2QI47 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ush2AQ2QI47 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ush2AQ2QI47 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ush2AQ2QI47 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC10.31□□□□□ -0.76
Ush2AQ2QI47 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ush2AQ2QI47 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ush2AQ2QI47 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC10.31□□□□□ -0.76
Ush2AQ2QI47 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC10.31□□□□□ -0.76
Ush2AQ2QI47 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Ush2AQ2QI47 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ush2AQ2QI47 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ush2AQ2QI47 Gm27032-201ENSMUST00000183124 1116 ntBASIC10.3□□□□□ -0.76
Ush2AQ2QI47 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ush2AQ2QI47 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ush2AQ2QI47 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ush2AQ2QI47 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ush2AQ2QI47 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ush2AQ2QI47 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Ush2AQ2QI47 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ush2AQ2QI47 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Ush2AQ2QI47 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Ush2AQ2QI47 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC10.3□□□□□ -0.76
Ush2AQ2QI47 Gm22697-201ENSMUST00000175194 63 ntBASIC10.3□□□□□ -0.76
Ush2AQ2QI47 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Ush2AQ2QI47 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ush2AQ2QI47 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC10.29□□□□□ -0.76
Ush2AQ2QI47 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Ush2AQ2QI47 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC10.29□□□□□ -0.76
Ush2AQ2QI47 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ush2AQ2QI47 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC10.29□□□□□ -0.76
Ush2AQ2QI47 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ush2AQ2QI47 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC10.29□□□□□ -0.76
Ush2AQ2QI47 Auts2-212ENSMUST00000178555 309 ntBASIC10.29□□□□□ -0.76
Ush2AQ2QI47 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Ush2AQ2QI47 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ush2AQ2QI47 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC10.29□□□□□ -0.76
Ush2AQ2QI47 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ush2AQ2QI47 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Ush2AQ2QI47 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Ush2AQ2QI47 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Ush2AQ2QI47 AC164629.2-201ENSMUST00000217916 270 ntBASIC10.28□□□□□ -0.76
Ush2AQ2QI47 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC10.28□□□□□ -0.76
Ush2AQ2QI47 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ush2AQ2QI47 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ush2AQ2QI47 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms