Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Thbs3Q05895 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Thbs3Q05895 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Thbs3Q05895 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Thbs3Q05895 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Thbs3Q05895 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.64■□□□□ 0.25
Thbs3Q05895 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Thbs3Q05895 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.64■□□□□ 0.25
Thbs3Q05895 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Thbs3Q05895 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Thbs3Q05895 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Thbs3Q05895 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Thbs3Q05895 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.63■□□□□ 0.25
Thbs3Q05895 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Thbs3Q05895 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Thbs3Q05895 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Thbs3Q05895 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Thbs3Q05895 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.63■□□□□ 0.25
Thbs3Q05895 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.63■□□□□ 0.25
Thbs3Q05895 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Thbs3Q05895 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC16.63■□□□□ 0.25
Thbs3Q05895 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC16.63■□□□□ 0.25
Thbs3Q05895 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Thbs3Q05895 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Thbs3Q05895 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.62■□□□□ 0.25
Thbs3Q05895 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Thbs3Q05895 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Thbs3Q05895 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Thbs3Q05895 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Thbs3Q05895 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Thbs3Q05895 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Thbs3Q05895 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
Thbs3Q05895 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Thbs3Q05895 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC16.62■□□□□ 0.25
Thbs3Q05895 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.62■□□□□ 0.25
Thbs3Q05895 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.62■□□□□ 0.25
Thbs3Q05895 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.62■□□□□ 0.25
Thbs3Q05895 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC16.62■□□□□ 0.25
Thbs3Q05895 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.62■□□□□ 0.25
Thbs3Q05895 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Thbs3Q05895 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Thbs3Q05895 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Thbs3Q05895 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Thbs3Q05895 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Thbs3Q05895 Reep4-203ENSMUST00000226563 1444 ntBASIC16.62■□□□□ 0.25
Thbs3Q05895 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Thbs3Q05895 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Thbs3Q05895 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Thbs3Q05895 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Thbs3Q05895 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC16.61■□□□□ 0.25
Thbs3Q05895 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Thbs3Q05895 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Thbs3Q05895 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.61■□□□□ 0.25
Thbs3Q05895 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Thbs3Q05895 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Thbs3Q05895 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.61■□□□□ 0.25
Thbs3Q05895 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.61■□□□□ 0.25
Thbs3Q05895 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Thbs3Q05895 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Thbs3Q05895 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Thbs3Q05895 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Thbs3Q05895 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Thbs3Q05895 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Thbs3Q05895 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Thbs3Q05895 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Thbs3Q05895 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Thbs3Q05895 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Thbs3Q05895 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Thbs3Q05895 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Thbs3Q05895 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Thbs3Q05895 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Thbs3Q05895 Gm42778-201ENSMUST00000199644 553 ntBASIC16.6■□□□□ 0.25
Thbs3Q05895 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Thbs3Q05895 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.6■□□□□ 0.25
Thbs3Q05895 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.6■□□□□ 0.25
Thbs3Q05895 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Thbs3Q05895 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Thbs3Q05895 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Thbs3Q05895 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Thbs3Q05895 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Thbs3Q05895 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Thbs3Q05895 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Thbs3Q05895 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Thbs3Q05895 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Thbs3Q05895 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Thbs3Q05895 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Thbs3Q05895 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.59■□□□□ 0.25
Thbs3Q05895 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Thbs3Q05895 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Thbs3Q05895 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Thbs3Q05895 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Thbs3Q05895 Gm13234-201ENSMUST00000120010 747 ntBASIC16.59■□□□□ 0.25
Thbs3Q05895 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Thbs3Q05895 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Thbs3Q05895 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Thbs3Q05895 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Thbs3Q05895 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Thbs3Q05895 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Thbs3Q05895 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Thbs3Q05895 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms