Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PrkdcP97313 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
PrkdcP97313 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
PrkdcP97313 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC13.22□□□□□ -0.29
PrkdcP97313 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PrkdcP97313 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
PrkdcP97313 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PrkdcP97313 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PrkdcP97313 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC13.22□□□□□ -0.29
PrkdcP97313 AC159205.6-201ENSMUST00000224935 887 ntBASIC13.22□□□□□ -0.29
PrkdcP97313 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PrkdcP97313 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
PrkdcP97313 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
PrkdcP97313 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PrkdcP97313 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PrkdcP97313 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PrkdcP97313 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
PrkdcP97313 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
PrkdcP97313 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
PrkdcP97313 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
PrkdcP97313 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC13.21□□□□□ -0.3
PrkdcP97313 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
PrkdcP97313 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
PrkdcP97313 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
PrkdcP97313 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PrkdcP97313 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
PrkdcP97313 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
PrkdcP97313 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PrkdcP97313 Gm6802-201ENSMUST00000167843 1983 ntBASIC13.2□□□□□ -0.3
PrkdcP97313 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC13.2□□□□□ -0.3
PrkdcP97313 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PrkdcP97313 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
PrkdcP97313 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PrkdcP97313 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PrkdcP97313 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PrkdcP97313 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PrkdcP97313 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.2□□□□□ -0.3
PrkdcP97313 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
PrkdcP97313 Gm3375-201ENSMUST00000203929 796 ntBASIC13.2□□□□□ -0.3
PrkdcP97313 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC13.2□□□□□ -0.3
PrkdcP97313 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PrkdcP97313 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PrkdcP97313 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
PrkdcP97313 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PrkdcP97313 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
PrkdcP97313 AC159205.3-201ENSMUST00000224614 874 ntBASIC13.2□□□□□ -0.3
PrkdcP97313 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PrkdcP97313 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
PrkdcP97313 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
PrkdcP97313 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
PrkdcP97313 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
PrkdcP97313 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
PrkdcP97313 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
PrkdcP97313 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
PrkdcP97313 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
PrkdcP97313 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC13.19□□□□□ -0.3
PrkdcP97313 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC13.19□□□□□ -0.3
PrkdcP97313 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PrkdcP97313 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PrkdcP97313 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PrkdcP97313 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PrkdcP97313 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC13.19□□□□□ -0.3
PrkdcP97313 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
PrkdcP97313 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
PrkdcP97313 Gm7284-201ENSMUST00000131667 944 ntBASIC13.19□□□□□ -0.3
PrkdcP97313 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC13.19□□□□□ -0.3
PrkdcP97313 Gm43672-201ENSMUST00000199072 1731 ntBASIC13.19□□□□□ -0.3
PrkdcP97313 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PrkdcP97313 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PrkdcP97313 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PrkdcP97313 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PrkdcP97313 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PrkdcP97313 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PrkdcP97313 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PrkdcP97313 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PrkdcP97313 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PrkdcP97313 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
PrkdcP97313 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
PrkdcP97313 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PrkdcP97313 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
PrkdcP97313 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PrkdcP97313 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PrkdcP97313 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
PrkdcP97313 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PrkdcP97313 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PrkdcP97313 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
PrkdcP97313 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PrkdcP97313 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PrkdcP97313 AC140264.2-202ENSMUST00000218746 817 ntBASIC13.17□□□□□ -0.3
PrkdcP97313 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PrkdcP97313 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PrkdcP97313 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC13.17□□□□□ -0.3
PrkdcP97313 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
PrkdcP97313 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
PrkdcP97313 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC13.17□□□□□ -0.3
PrkdcP97313 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PrkdcP97313 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PrkdcP97313 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PrkdcP97313 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
PrkdcP97313 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms