Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pdlim4P70271 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC15.73■□□□□ 0.11
Pdlim4P70271 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim4P70271 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim4P70271 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim4P70271 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim4P70271 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim4P70271 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Pdlim4P70271 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
Pdlim4P70271 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim4P70271 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim4P70271 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim4P70271 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim4P70271 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pdlim4P70271 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pdlim4P70271 Gm43545-201ENSMUST00000196765 2779 ntBASIC15.72■□□□□ 0.11
Pdlim4P70271 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pdlim4P70271 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC15.72■□□□□ 0.11
Pdlim4P70271 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pdlim4P70271 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pdlim4P70271 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pdlim4P70271 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Pdlim4P70271 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pdlim4P70271 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pdlim4P70271 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pdlim4P70271 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pdlim4P70271 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pdlim4P70271 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pdlim4P70271 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pdlim4P70271 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC15.71■□□□□ 0.11
Pdlim4P70271 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pdlim4P70271 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pdlim4P70271 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC15.71■□□□□ 0.11
Pdlim4P70271 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pdlim4P70271 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pdlim4P70271 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pdlim4P70271 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pdlim4P70271 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pdlim4P70271 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pdlim4P70271 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pdlim4P70271 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pdlim4P70271 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pdlim4P70271 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC15.7■□□□□ 0.1
Pdlim4P70271 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pdlim4P70271 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Pdlim4P70271 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pdlim4P70271 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pdlim4P70271 Gm14281-201ENSMUST00000121700 1294 ntBASIC15.7■□□□□ 0.1
Pdlim4P70271 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pdlim4P70271 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC15.7■□□□□ 0.1
Pdlim4P70271 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC15.7■□□□□ 0.1
Pdlim4P70271 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pdlim4P70271 Gm9988-201ENSMUST00000069786 435 ntBASIC15.7■□□□□ 0.1
Pdlim4P70271 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pdlim4P70271 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pdlim4P70271 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC15.7■□□□□ 0.1
Pdlim4P70271 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pdlim4P70271 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pdlim4P70271 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pdlim4P70271 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pdlim4P70271 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pdlim4P70271 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pdlim4P70271 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pdlim4P70271 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pdlim4P70271 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pdlim4P70271 Gm10493-201ENSMUST00000097270 612 ntBASIC15.69■□□□□ 0.1
Pdlim4P70271 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pdlim4P70271 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pdlim4P70271 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pdlim4P70271 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Pdlim4P70271 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Pdlim4P70271 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Pdlim4P70271 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pdlim4P70271 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pdlim4P70271 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pdlim4P70271 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pdlim4P70271 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pdlim4P70271 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC15.68■□□□□ 0.1
Pdlim4P70271 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Pdlim4P70271 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC15.68■□□□□ 0.1
Pdlim4P70271 Gm5874-201ENSMUST00000096101 508 ntBASIC15.68■□□□□ 0.1
Pdlim4P70271 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pdlim4P70271 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC15.68■□□□□ 0.1
Pdlim4P70271 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pdlim4P70271 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pdlim4P70271 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.68■□□□□ 0.1
Pdlim4P70271 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pdlim4P70271 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pdlim4P70271 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pdlim4P70271 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pdlim4P70271 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Pdlim4P70271 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pdlim4P70271 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pdlim4P70271 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Pdlim4P70271 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pdlim4P70271 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pdlim4P70271 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pdlim4P70271 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pdlim4P70271 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pdlim4P70271 Gm10129-202ENSMUST00000193100 1316 ntBASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms