Protein–RNA interactions for Protein: P70196

Traf6, TNF receptor-associated factor 6, mousemouse

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6P70196 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Traf6P70196 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.62■□□□□ 0.57
Traf6P70196 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Traf6P70196 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Traf6P70196 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Traf6P70196 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Traf6P70196 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Traf6P70196 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Traf6P70196 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Traf6P70196 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.61■□□□□ 0.57
Traf6P70196 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Traf6P70196 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Traf6P70196 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.61■□□□□ 0.57
Traf6P70196 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.61■□□□□ 0.57
Traf6P70196 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Traf6P70196 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Traf6P70196 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Traf6P70196 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Traf6P70196 BC021767-201ENSMUST00000126387 1716 ntBASIC18.6■□□□□ 0.57
Traf6P70196 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Traf6P70196 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Traf6P70196 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Traf6P70196 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Traf6P70196 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.6■□□□□ 0.57
Traf6P70196 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
Traf6P70196 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.6■□□□□ 0.57
Traf6P70196 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Traf6P70196 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.6■□□□□ 0.57
Traf6P70196 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Traf6P70196 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Traf6P70196 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Traf6P70196 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Traf6P70196 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Traf6P70196 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Traf6P70196 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Traf6P70196 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
Traf6P70196 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.6■□□□□ 0.57
Traf6P70196 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Traf6P70196 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Traf6P70196 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Traf6P70196 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.59■□□□□ 0.57
Traf6P70196 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.59■□□□□ 0.57
Traf6P70196 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Traf6P70196 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Traf6P70196 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Traf6P70196 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Traf6P70196 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Traf6P70196 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Traf6P70196 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Traf6P70196 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Traf6P70196 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.58■□□□□ 0.56
Traf6P70196 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.58■□□□□ 0.56
Traf6P70196 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.58■□□□□ 0.56
Traf6P70196 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Traf6P70196 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
Traf6P70196 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.58■□□□□ 0.56
Traf6P70196 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Traf6P70196 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Traf6P70196 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Traf6P70196 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Traf6P70196 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Traf6P70196 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Traf6P70196 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Traf6P70196 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Traf6P70196 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Traf6P70196 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Traf6P70196 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Traf6P70196 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Traf6P70196 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Traf6P70196 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Traf6P70196 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Traf6P70196 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Traf6P70196 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Traf6P70196 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Traf6P70196 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.57■□□□□ 0.56
Traf6P70196 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Traf6P70196 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Traf6P70196 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Traf6P70196 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Traf6P70196 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Traf6P70196 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Traf6P70196 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Traf6P70196 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Traf6P70196 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Traf6P70196 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Traf6P70196 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Traf6P70196 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.56■□□□□ 0.56
Traf6P70196 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Traf6P70196 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Traf6P70196 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Traf6P70196 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Traf6P70196 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Traf6P70196 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Traf6P70196 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
Traf6P70196 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Traf6P70196 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Traf6P70196 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Traf6P70196 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Traf6P70196 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Traf6P70196 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 99.5 ms