Protein–RNA interactions for Protein: P56390

Cks2, Cyclin-dependent kinases regulatory subunit 2, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks2P56390 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cks2P56390 Rncr4-201ENSMUST00000194541 2234 ntBASIC15.84■□□□□ 0.13
Cks2P56390 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cks2P56390 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
Cks2P56390 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cks2P56390 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Cks2P56390 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.83■□□□□ 0.12
Cks2P56390 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cks2P56390 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC15.83■□□□□ 0.12
Cks2P56390 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC15.83■□□□□ 0.12
Cks2P56390 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.12
Cks2P56390 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cks2P56390 Gm9959-201ENSMUST00000068277 390 ntBASIC15.83■□□□□ 0.12
Cks2P56390 Gm32699-201ENSMUST00000221728 1988 ntBASIC15.83■□□□□ 0.12
Cks2P56390 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cks2P56390 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cks2P56390 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cks2P56390 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Cks2P56390 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cks2P56390 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cks2P56390 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC15.82■□□□□ 0.12
Cks2P56390 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cks2P56390 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cks2P56390 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cks2P56390 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cks2P56390 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Cks2P56390 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Cks2P56390 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
Cks2P56390 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cks2P56390 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cks2P56390 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cks2P56390 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cks2P56390 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC15.82■□□□□ 0.12
Cks2P56390 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cks2P56390 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Cks2P56390 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cks2P56390 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cks2P56390 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cks2P56390 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cks2P56390 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cks2P56390 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cks2P56390 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC15.81■□□□□ 0.12
Cks2P56390 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cks2P56390 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cks2P56390 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Cks2P56390 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cks2P56390 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cks2P56390 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cks2P56390 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cks2P56390 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cks2P56390 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cks2P56390 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cks2P56390 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC15.8■□□□□ 0.12
Cks2P56390 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cks2P56390 Serp2-204ENSMUST00000228055 705 ntBASIC15.8■□□□□ 0.12
Cks2P56390 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cks2P56390 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Cks2P56390 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cks2P56390 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cks2P56390 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cks2P56390 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cks2P56390 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cks2P56390 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cks2P56390 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Cks2P56390 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Cks2P56390 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cks2P56390 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cks2P56390 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC15.79■□□□□ 0.12
Cks2P56390 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cks2P56390 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Cks2P56390 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cks2P56390 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cks2P56390 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Cks2P56390 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.79■□□□□ 0.12
Cks2P56390 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cks2P56390 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Cks2P56390 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cks2P56390 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cks2P56390 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC15.78■□□□□ 0.12
Cks2P56390 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC15.78■□□□□ 0.12
Cks2P56390 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Cks2P56390 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cks2P56390 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cks2P56390 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC15.78■□□□□ 0.12
Cks2P56390 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Cks2P56390 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cks2P56390 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Cks2P56390 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cks2P56390 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cks2P56390 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cks2P56390 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cks2P56390 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cks2P56390 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cks2P56390 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cks2P56390 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cks2P56390 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Cks2P56390 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cks2P56390 Gm10209-201ENSMUST00000203397 1607 ntBASIC15.77■□□□□ 0.12
Cks2P56390 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC15.77■□□□□ 0.12
Cks2P56390 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms