Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdkn2bP55271 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdkn2bP55271 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdkn2bP55271 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.18■□□□□ 0.5
Cdkn2bP55271 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdkn2bP55271 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdkn2bP55271 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cdkn2bP55271 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdkn2bP55271 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cdkn2bP55271 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdkn2bP55271 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdkn2bP55271 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdkn2bP55271 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Cdkn2bP55271 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.17■□□□□ 0.5
Cdkn2bP55271 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Cdkn2bP55271 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.17■□□□□ 0.5
Cdkn2bP55271 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Cdkn2bP55271 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cdkn2bP55271 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdkn2bP55271 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cdkn2bP55271 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdkn2bP55271 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdkn2bP55271 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdkn2bP55271 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cdkn2bP55271 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdkn2bP55271 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Cdkn2bP55271 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdkn2bP55271 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cdkn2bP55271 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdkn2bP55271 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdkn2bP55271 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdkn2bP55271 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.16■□□□□ 0.5
Cdkn2bP55271 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cdkn2bP55271 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.16■□□□□ 0.5
Cdkn2bP55271 Spcs1-204ENSMUST00000226782 949 ntBASIC18.16■□□□□ 0.5
Cdkn2bP55271 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdkn2bP55271 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdkn2bP55271 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdkn2bP55271 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdkn2bP55271 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Cdkn2bP55271 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdkn2bP55271 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdkn2bP55271 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdkn2bP55271 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdkn2bP55271 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.15■□□□□ 0.5
Cdkn2bP55271 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Cdkn2bP55271 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.15■□□□□ 0.5
Cdkn2bP55271 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Cdkn2bP55271 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.15■□□□□ 0.5
Cdkn2bP55271 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdkn2bP55271 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdkn2bP55271 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdkn2bP55271 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdkn2bP55271 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdkn2bP55271 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdkn2bP55271 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdkn2bP55271 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdkn2bP55271 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Cdkn2bP55271 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cdkn2bP55271 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cdkn2bP55271 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
Cdkn2bP55271 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdkn2bP55271 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdkn2bP55271 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.14■□□□□ 0.49
Cdkn2bP55271 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.14■□□□□ 0.49
Cdkn2bP55271 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdkn2bP55271 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Cdkn2bP55271 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Cdkn2bP55271 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.14■□□□□ 0.49
Cdkn2bP55271 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cdkn2bP55271 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdkn2bP55271 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.14■□□□□ 0.49
Cdkn2bP55271 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cdkn2bP55271 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdkn2bP55271 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdkn2bP55271 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdkn2bP55271 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.13■□□□□ 0.49
Cdkn2bP55271 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdkn2bP55271 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdkn2bP55271 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdkn2bP55271 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cdkn2bP55271 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cdkn2bP55271 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdkn2bP55271 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdkn2bP55271 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdkn2bP55271 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdkn2bP55271 Rarb-207ENSMUST00000225921 2756 ntBASIC18.13■□□□□ 0.49
Cdkn2bP55271 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cdkn2bP55271 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdkn2bP55271 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdkn2bP55271 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.12■□□□□ 0.49
Cdkn2bP55271 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdkn2bP55271 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.12■□□□□ 0.49
Cdkn2bP55271 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.12■□□□□ 0.49
Cdkn2bP55271 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdkn2bP55271 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdkn2bP55271 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.12■□□□□ 0.49
Cdkn2bP55271 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cdkn2bP55271 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdkn2bP55271 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms