Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NrlP54846 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.23■□□□□ 0.83
NrlP54846 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NrlP54846 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
NrlP54846 Gm10252-201ENSMUST00000209541 832 ntBASIC20.23■□□□□ 0.83
NrlP54846 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NrlP54846 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.23■□□□□ 0.83
NrlP54846 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.23■□□□□ 0.83
NrlP54846 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NrlP54846 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.23■□□□□ 0.83
NrlP54846 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NrlP54846 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NrlP54846 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NrlP54846 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NrlP54846 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
NrlP54846 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
NrlP54846 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.22■□□□□ 0.83
NrlP54846 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NrlP54846 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.22■□□□□ 0.83
NrlP54846 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.22■□□□□ 0.83
NrlP54846 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
NrlP54846 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NrlP54846 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NrlP54846 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NrlP54846 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
NrlP54846 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NrlP54846 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NrlP54846 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NrlP54846 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NrlP54846 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NrlP54846 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NrlP54846 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.21■□□□□ 0.83
NrlP54846 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.21■□□□□ 0.83
NrlP54846 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.21■□□□□ 0.83
NrlP54846 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
NrlP54846 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NrlP54846 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NrlP54846 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NrlP54846 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
NrlP54846 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NrlP54846 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
NrlP54846 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NrlP54846 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.2■□□□□ 0.82
NrlP54846 Gm37856-201ENSMUST00000191634 999 ntBASIC20.2■□□□□ 0.82
NrlP54846 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.2■□□□□ 0.82
NrlP54846 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
NrlP54846 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NrlP54846 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NrlP54846 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
NrlP54846 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.2■□□□□ 0.82
NrlP54846 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NrlP54846 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NrlP54846 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.19■□□□□ 0.82
NrlP54846 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NrlP54846 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NrlP54846 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.19■□□□□ 0.82
NrlP54846 Gm7860-201ENSMUST00000121190 879 ntBASIC20.19■□□□□ 0.82
NrlP54846 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NrlP54846 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NrlP54846 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NrlP54846 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NrlP54846 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NrlP54846 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NrlP54846 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NrlP54846 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
NrlP54846 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NrlP54846 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.18■□□□□ 0.82
NrlP54846 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NrlP54846 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC20.18■□□□□ 0.82
NrlP54846 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.18■□□□□ 0.82
NrlP54846 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NrlP54846 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NrlP54846 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NrlP54846 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NrlP54846 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
NrlP54846 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NrlP54846 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NrlP54846 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NrlP54846 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
NrlP54846 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NrlP54846 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
NrlP54846 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
NrlP54846 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
NrlP54846 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
NrlP54846 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
NrlP54846 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NrlP54846 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NrlP54846 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NrlP54846 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
NrlP54846 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NrlP54846 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NrlP54846 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NrlP54846 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
NrlP54846 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.16■□□□□ 0.82
NrlP54846 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NrlP54846 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NrlP54846 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NrlP54846 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NrlP54846 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
NrlP54846 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms