Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx6P54823 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Ddx6P54823 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.37■□□□□ 0.69
Ddx6P54823 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Ddx6P54823 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx6P54823 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx6P54823 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Ddx6P54823 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx6P54823 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx6P54823 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx6P54823 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.36■□□□□ 0.69
Ddx6P54823 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Ddx6P54823 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx6P54823 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx6P54823 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx6P54823 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx6P54823 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx6P54823 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
Ddx6P54823 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ddx6P54823 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ddx6P54823 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ddx6P54823 Gm13168-201ENSMUST00000121771 632 ntBASIC19.35■□□□□ 0.69
Ddx6P54823 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ddx6P54823 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ddx6P54823 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.35■□□□□ 0.69
Ddx6P54823 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ddx6P54823 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx6P54823 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.34■□□□□ 0.69
Ddx6P54823 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx6P54823 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx6P54823 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx6P54823 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx6P54823 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx6P54823 Trmt13-210ENSMUST00000198454 880 ntBASIC19.34■□□□□ 0.69
Ddx6P54823 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.34■□□□□ 0.69
Ddx6P54823 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx6P54823 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx6P54823 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx6P54823 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx6P54823 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx6P54823 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx6P54823 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ddx6P54823 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
Ddx6P54823 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ddx6P54823 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ddx6P54823 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ddx6P54823 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ddx6P54823 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.33■□□□□ 0.68
Ddx6P54823 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ddx6P54823 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ddx6P54823 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ddx6P54823 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Ddx6P54823 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ddx6P54823 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ddx6P54823 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ddx6P54823 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ddx6P54823 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.32■□□□□ 0.68
Ddx6P54823 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx6P54823 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx6P54823 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.32■□□□□ 0.68
Ddx6P54823 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx6P54823 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.32■□□□□ 0.68
Ddx6P54823 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.32■□□□□ 0.68
Ddx6P54823 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx6P54823 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx6P54823 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx6P54823 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.32■□□□□ 0.68
Ddx6P54823 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx6P54823 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx6P54823 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx6P54823 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx6P54823 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx6P54823 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Ddx6P54823 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.31■□□□□ 0.68
Ddx6P54823 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx6P54823 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.31■□□□□ 0.68
Ddx6P54823 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.31■□□□□ 0.68
Ddx6P54823 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.31■□□□□ 0.68
Ddx6P54823 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Ddx6P54823 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx6P54823 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ddx6P54823 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ddx6P54823 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ddx6P54823 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ddx6P54823 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ddx6P54823 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ddx6P54823 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ddx6P54823 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.3■□□□□ 0.68
Ddx6P54823 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ddx6P54823 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ddx6P54823 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ddx6P54823 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Ddx6P54823 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ddx6P54823 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Ddx6P54823 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ddx6P54823 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ddx6P54823 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ddx6P54823 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.29■□□□□ 0.68
Ddx6P54823 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.29■□□□□ 0.68
Ddx6P54823 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms