Protein–RNA interactions for Protein: P51675

Ccr1, C-C chemokine receptor type 1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr1P51675 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccr1P51675 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccr1P51675 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccr1P51675 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccr1P51675 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccr1P51675 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccr1P51675 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccr1P51675 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccr1P51675 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.7■□□□□ 0.9
Ccr1P51675 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.7■□□□□ 0.9
Ccr1P51675 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ccr1P51675 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.7■□□□□ 0.9
Ccr1P51675 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccr1P51675 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccr1P51675 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccr1P51675 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.69■□□□□ 0.9
Ccr1P51675 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccr1P51675 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Ccr1P51675 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccr1P51675 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ccr1P51675 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.69■□□□□ 0.9
Ccr1P51675 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccr1P51675 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccr1P51675 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Ccr1P51675 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccr1P51675 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccr1P51675 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccr1P51675 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccr1P51675 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccr1P51675 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccr1P51675 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Ccr1P51675 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccr1P51675 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccr1P51675 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccr1P51675 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ccr1P51675 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.68■□□□□ 0.9
Ccr1P51675 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Ccr1P51675 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
Ccr1P51675 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccr1P51675 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccr1P51675 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Ccr1P51675 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.67■□□□□ 0.9
Ccr1P51675 Gm10653-202ENSMUST00000139570 835 ntBASIC20.67■□□□□ 0.9
Ccr1P51675 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.67■□□□□ 0.9
Ccr1P51675 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ccr1P51675 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.67■□□□□ 0.9
Ccr1P51675 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Ccr1P51675 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccr1P51675 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ccr1P51675 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.67■□□□□ 0.9
Ccr1P51675 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccr1P51675 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
Ccr1P51675 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccr1P51675 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccr1P51675 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccr1P51675 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccr1P51675 Gm12527-201ENSMUST00000117967 564 ntBASIC20.66■□□□□ 0.9
Ccr1P51675 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.66■□□□□ 0.9
Ccr1P51675 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.66■□□□□ 0.9
Ccr1P51675 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccr1P51675 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.66■□□□□ 0.9
Ccr1P51675 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ccr1P51675 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ccr1P51675 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccr1P51675 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccr1P51675 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Ccr1P51675 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccr1P51675 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccr1P51675 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccr1P51675 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccr1P51675 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ccr1P51675 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ccr1P51675 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccr1P51675 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ccr1P51675 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.65■□□□□ 0.9
Ccr1P51675 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccr1P51675 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccr1P51675 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccr1P51675 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ccr1P51675 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Ccr1P51675 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ccr1P51675 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ccr1P51675 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ccr1P51675 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ccr1P51675 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ccr1P51675 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.64■□□□□ 0.89
Ccr1P51675 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccr1P51675 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccr1P51675 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccr1P51675 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccr1P51675 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccr1P51675 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ccr1P51675 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccr1P51675 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccr1P51675 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.63■□□□□ 0.89
Ccr1P51675 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
Ccr1P51675 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccr1P51675 Gm26524-201ENSMUST00000192339 390 ntBASIC20.63■□□□□ 0.89
Ccr1P51675 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccr1P51675 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms