Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RoraP51448 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RoraP51448 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.89■□□□□ 0.45
RoraP51448 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.89■□□□□ 0.45
RoraP51448 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RoraP51448 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.89■□□□□ 0.45
RoraP51448 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
RoraP51448 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.89■□□□□ 0.45
RoraP51448 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RoraP51448 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.89■□□□□ 0.45
RoraP51448 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
RoraP51448 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
RoraP51448 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RoraP51448 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RoraP51448 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RoraP51448 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RoraP51448 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RoraP51448 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RoraP51448 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RoraP51448 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RoraP51448 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RoraP51448 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RoraP51448 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RoraP51448 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RoraP51448 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
RoraP51448 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RoraP51448 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RoraP51448 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.87■□□□□ 0.45
RoraP51448 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RoraP51448 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.87■□□□□ 0.45
RoraP51448 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.87■□□□□ 0.45
RoraP51448 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
RoraP51448 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
RoraP51448 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
RoraP51448 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RoraP51448 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.87■□□□□ 0.45
RoraP51448 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.87■□□□□ 0.45
RoraP51448 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RoraP51448 Gm7290-201ENSMUST00000104990 617 ntBASIC17.86■□□□□ 0.45
RoraP51448 Gm12918-201ENSMUST00000120234 636 ntBASIC17.86■□□□□ 0.45
RoraP51448 Gm15710-201ENSMUST00000121821 636 ntBASIC17.86■□□□□ 0.45
RoraP51448 Nespas-201ENSMUST00000143738 1083 ntBASIC17.86■□□□□ 0.45
RoraP51448 Gm5075-201ENSMUST00000196916 622 ntBASIC17.86■□□□□ 0.45
RoraP51448 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
RoraP51448 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RoraP51448 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.86■□□□□ 0.45
RoraP51448 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.86■□□□□ 0.45
RoraP51448 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
RoraP51448 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RoraP51448 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RoraP51448 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RoraP51448 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RoraP51448 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RoraP51448 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
RoraP51448 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.85■□□□□ 0.45
RoraP51448 Gm13148-201ENSMUST00000118892 745 ntBASIC17.85■□□□□ 0.45
RoraP51448 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.85■□□□□ 0.45
RoraP51448 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RoraP51448 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RoraP51448 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.85■□□□□ 0.45
RoraP51448 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.85■□□□□ 0.45
RoraP51448 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RoraP51448 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RoraP51448 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RoraP51448 Gm6365-201ENSMUST00000054711 744 ntBASIC17.85■□□□□ 0.45
RoraP51448 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
RoraP51448 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RoraP51448 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RoraP51448 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
RoraP51448 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
RoraP51448 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
RoraP51448 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RoraP51448 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RoraP51448 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
RoraP51448 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
RoraP51448 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RoraP51448 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RoraP51448 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RoraP51448 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RoraP51448 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RoraP51448 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RoraP51448 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RoraP51448 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RoraP51448 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.45
RoraP51448 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
RoraP51448 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
RoraP51448 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RoraP51448 Gm12441-201ENSMUST00000121806 588 ntBASIC17.83■□□□□ 0.44
RoraP51448 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RoraP51448 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RoraP51448 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.83■□□□□ 0.44
RoraP51448 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.83■□□□□ 0.44
RoraP51448 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RoraP51448 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.83■□□□□ 0.44
RoraP51448 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RoraP51448 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RoraP51448 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
RoraP51448 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RoraP51448 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RoraP51448 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms