Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SftpbP50405 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SftpbP50405 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SftpbP50405 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.37■□□□□ 0.69
SftpbP50405 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SftpbP50405 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
SftpbP50405 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
SftpbP50405 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SftpbP50405 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SftpbP50405 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SftpbP50405 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SftpbP50405 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SftpbP50405 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
SftpbP50405 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SftpbP50405 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SftpbP50405 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SftpbP50405 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SftpbP50405 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SftpbP50405 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SftpbP50405 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SftpbP50405 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SftpbP50405 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SftpbP50405 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SftpbP50405 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SftpbP50405 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SftpbP50405 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SftpbP50405 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SftpbP50405 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SftpbP50405 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SftpbP50405 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SftpbP50405 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SftpbP50405 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SftpbP50405 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SftpbP50405 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SftpbP50405 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SftpbP50405 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SftpbP50405 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SftpbP50405 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SftpbP50405 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
SftpbP50405 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
SftpbP50405 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SftpbP50405 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SftpbP50405 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SftpbP50405 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SftpbP50405 Gm43137-201ENSMUST00000198052 594 ntBASIC19.34■□□□□ 0.69
SftpbP50405 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SftpbP50405 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SftpbP50405 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SftpbP50405 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
SftpbP50405 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SftpbP50405 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
SftpbP50405 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SftpbP50405 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.34■□□□□ 0.69
SftpbP50405 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
SftpbP50405 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SftpbP50405 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SftpbP50405 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SftpbP50405 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SftpbP50405 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SftpbP50405 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SftpbP50405 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.33■□□□□ 0.69
SftpbP50405 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SftpbP50405 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SftpbP50405 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SftpbP50405 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SftpbP50405 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
SftpbP50405 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SftpbP50405 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.33■□□□□ 0.68
SftpbP50405 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
SftpbP50405 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SftpbP50405 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SftpbP50405 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SftpbP50405 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.32■□□□□ 0.68
SftpbP50405 Spcs1-204ENSMUST00000226782 949 ntBASIC19.32■□□□□ 0.68
SftpbP50405 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SftpbP50405 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SftpbP50405 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SftpbP50405 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
SftpbP50405 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SftpbP50405 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SftpbP50405 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SftpbP50405 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SftpbP50405 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SftpbP50405 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SftpbP50405 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.31■□□□□ 0.68
SftpbP50405 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
SftpbP50405 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SftpbP50405 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SftpbP50405 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.31■□□□□ 0.68
SftpbP50405 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.31■□□□□ 0.68
SftpbP50405 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SftpbP50405 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
SftpbP50405 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SftpbP50405 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SftpbP50405 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SftpbP50405 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SftpbP50405 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.3■□□□□ 0.68
SftpbP50405 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
SftpbP50405 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
SftpbP50405 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms