Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Rfx3P48381 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.09■□□□□ 0.33
Rfx3P48381 Gm21956-201ENSMUST00000179946 522 ntBASIC17.09■□□□□ 0.33
Rfx3P48381 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.09■□□□□ 0.33
Rfx3P48381 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfx3P48381 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfx3P48381 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfx3P48381 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfx3P48381 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfx3P48381 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfx3P48381 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rfx3P48381 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Rfx3P48381 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Rfx3P48381 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rfx3P48381 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rfx3P48381 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rfx3P48381 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rfx3P48381 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rfx3P48381 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rfx3P48381 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rfx3P48381 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rfx3P48381 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rfx3P48381 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx3P48381 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx3P48381 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx3P48381 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx3P48381 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx3P48381 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx3P48381 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.07■□□□□ 0.32
Rfx3P48381 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Rfx3P48381 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx3P48381 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx3P48381 Spcs1-204ENSMUST00000226782 949 ntBASIC17.07■□□□□ 0.32
Rfx3P48381 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Rfx3P48381 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Rfx3P48381 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx3P48381 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.07■□□□□ 0.32
Rfx3P48381 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx3P48381 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.07■□□□□ 0.32
Rfx3P48381 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx3P48381 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.07■□□□□ 0.32
Rfx3P48381 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx3P48381 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx3P48381 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx3P48381 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Rfx3P48381 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx3P48381 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx3P48381 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.06■□□□□ 0.32
Rfx3P48381 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
Rfx3P48381 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx3P48381 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.06■□□□□ 0.32
Rfx3P48381 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx3P48381 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx3P48381 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Rfx3P48381 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Rfx3P48381 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx3P48381 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Rfx3P48381 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx3P48381 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx3P48381 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Rfx3P48381 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx3P48381 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx3P48381 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx3P48381 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx3P48381 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Rfx3P48381 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx3P48381 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Rfx3P48381 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx3P48381 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.05■□□□□ 0.32
Rfx3P48381 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx3P48381 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Rfx3P48381 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Rfx3P48381 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.04■□□□□ 0.32
Rfx3P48381 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Rfx3P48381 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Rfx3P48381 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx3P48381 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx3P48381 Serp2-204ENSMUST00000228055 705 ntBASIC17.04■□□□□ 0.32
Rfx3P48381 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx3P48381 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.04■□□□□ 0.32
Rfx3P48381 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.04■□□□□ 0.32
Rfx3P48381 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx3P48381 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx3P48381 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx3P48381 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.03■□□□□ 0.32
Rfx3P48381 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx3P48381 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.03■□□□□ 0.32
Rfx3P48381 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.03■□□□□ 0.32
Rfx3P48381 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx3P48381 BC021767-201ENSMUST00000126387 1716 ntBASIC17.03■□□□□ 0.32
Rfx3P48381 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx3P48381 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Rfx3P48381 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx3P48381 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.03■□□□□ 0.32
Rfx3P48381 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rfx3P48381 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rfx3P48381 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rfx3P48381 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rfx3P48381 Gm12821-201ENSMUST00000120022 600 ntBASIC17.02■□□□□ 0.32
Rfx3P48381 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms