Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TgfaP48030 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
TgfaP48030 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TgfaP48030 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TgfaP48030 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TgfaP48030 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.49■□□□□ 0.23
TgfaP48030 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TgfaP48030 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TgfaP48030 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
TgfaP48030 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC16.49■□□□□ 0.23
TgfaP48030 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TgfaP48030 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.48■□□□□ 0.23
TgfaP48030 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TgfaP48030 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.48■□□□□ 0.23
TgfaP48030 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TgfaP48030 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TgfaP48030 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.48■□□□□ 0.23
TgfaP48030 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
TgfaP48030 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.48■□□□□ 0.23
TgfaP48030 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.48■□□□□ 0.23
TgfaP48030 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TgfaP48030 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TgfaP48030 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TgfaP48030 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
TgfaP48030 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TgfaP48030 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TgfaP48030 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
TgfaP48030 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TgfaP48030 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TgfaP48030 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TgfaP48030 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TgfaP48030 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.47■□□□□ 0.23
TgfaP48030 Gm44549-201ENSMUST00000208351 577 ntBASIC16.47■□□□□ 0.23
TgfaP48030 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TgfaP48030 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.47■□□□□ 0.23
TgfaP48030 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TgfaP48030 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
TgfaP48030 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TgfaP48030 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TgfaP48030 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TgfaP48030 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TgfaP48030 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TgfaP48030 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TgfaP48030 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TgfaP48030 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TgfaP48030 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TgfaP48030 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.46■□□□□ 0.23
TgfaP48030 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TgfaP48030 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TgfaP48030 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
TgfaP48030 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TgfaP48030 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TgfaP48030 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TgfaP48030 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TgfaP48030 Gm15378-201ENSMUST00000121894 207 ntBASIC16.45■□□□□ 0.22
TgfaP48030 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TgfaP48030 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.45■□□□□ 0.22
TgfaP48030 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.45■□□□□ 0.22
TgfaP48030 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TgfaP48030 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TgfaP48030 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.45■□□□□ 0.22
TgfaP48030 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TgfaP48030 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
TgfaP48030 Gm32051-202ENSMUST00000197905 2385 ntBASIC16.45■□□□□ 0.22
TgfaP48030 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TgfaP48030 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TgfaP48030 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TgfaP48030 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TgfaP48030 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TgfaP48030 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TgfaP48030 Gm11249-201ENSMUST00000117071 859 ntBASIC16.44■□□□□ 0.22
TgfaP48030 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
TgfaP48030 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
TgfaP48030 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.44■□□□□ 0.22
TgfaP48030 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.44■□□□□ 0.22
TgfaP48030 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TgfaP48030 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TgfaP48030 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TgfaP48030 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
TgfaP48030 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TgfaP48030 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TgfaP48030 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.43■□□□□ 0.22
TgfaP48030 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TgfaP48030 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TgfaP48030 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TgfaP48030 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TgfaP48030 Gm15565-201ENSMUST00000118890 427 ntBASIC16.43■□□□□ 0.22
TgfaP48030 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TgfaP48030 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.43■□□□□ 0.22
TgfaP48030 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TgfaP48030 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TgfaP48030 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.43■□□□□ 0.22
TgfaP48030 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TgfaP48030 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TgfaP48030 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TgfaP48030 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TgfaP48030 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TgfaP48030 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TgfaP48030 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
TgfaP48030 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms