Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gli1P47806 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gli1P47806 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Gli1P47806 Gm43173-201ENSMUST00000202246 593 ntBASIC18.43■□□□□ 0.54
Gli1P47806 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gli1P47806 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Gli1P47806 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gli1P47806 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Gli1P47806 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Gli1P47806 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gli1P47806 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gli1P47806 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.42■□□□□ 0.54
Gli1P47806 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
Gli1P47806 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gli1P47806 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gli1P47806 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.42■□□□□ 0.54
Gli1P47806 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Gli1P47806 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gli1P47806 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gli1P47806 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Gli1P47806 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gli1P47806 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gli1P47806 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gli1P47806 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gli1P47806 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gli1P47806 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.41■□□□□ 0.54
Gli1P47806 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gli1P47806 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.41■□□□□ 0.54
Gli1P47806 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gli1P47806 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gli1P47806 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gli1P47806 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.41■□□□□ 0.54
Gli1P47806 Gm7291-201ENSMUST00000199147 382 ntBASIC18.41■□□□□ 0.54
Gli1P47806 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gli1P47806 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.41■□□□□ 0.54
Gli1P47806 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Gli1P47806 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gli1P47806 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
Gli1P47806 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Gli1P47806 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.41■□□□□ 0.54
Gli1P47806 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Gli1P47806 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gli1P47806 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gli1P47806 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gli1P47806 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Gli1P47806 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gli1P47806 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.4■□□□□ 0.54
Gli1P47806 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gli1P47806 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gli1P47806 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Gli1P47806 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Gli1P47806 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.39■□□□□ 0.54
Gli1P47806 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
Gli1P47806 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Gli1P47806 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.39■□□□□ 0.53
Gli1P47806 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gli1P47806 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gli1P47806 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gli1P47806 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.39■□□□□ 0.53
Gli1P47806 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gli1P47806 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gli1P47806 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Gli1P47806 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.39■□□□□ 0.53
Gli1P47806 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.39■□□□□ 0.53
Gli1P47806 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Gli1P47806 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.38■□□□□ 0.53
Gli1P47806 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gli1P47806 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Gli1P47806 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.38■□□□□ 0.53
Gli1P47806 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Gli1P47806 Gm12251-201ENSMUST00000117893 792 ntBASIC18.38■□□□□ 0.53
Gli1P47806 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Gli1P47806 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Gli1P47806 Gm42569-201ENSMUST00000200539 472 ntBASIC18.38■□□□□ 0.53
Gli1P47806 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gli1P47806 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.38■□□□□ 0.53
Gli1P47806 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gli1P47806 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gli1P47806 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Gli1P47806 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Gli1P47806 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gli1P47806 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Gli1P47806 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gli1P47806 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Gli1P47806 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Gli1P47806 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Gli1P47806 Gm26833-201ENSMUST00000180899 440 ntBASIC18.37■□□□□ 0.53
Gli1P47806 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.37■□□□□ 0.53
Gli1P47806 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.37■□□□□ 0.53
Gli1P47806 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.37■□□□□ 0.53
Gli1P47806 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gli1P47806 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Gli1P47806 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gli1P47806 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Gli1P47806 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Gli1P47806 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Gli1P47806 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gli1P47806 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Gli1P47806 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.37■□□□□ 0.53
Gli1P47806 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms