Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx2-6P43688 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Nkx2-6P43688 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx2-6P43688 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.95■□□□□ 0.46
Nkx2-6P43688 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.95■□□□□ 0.46
Nkx2-6P43688 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx2-6P43688 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.95■□□□□ 0.46
Nkx2-6P43688 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx2-6P43688 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx2-6P43688 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.95■□□□□ 0.46
Nkx2-6P43688 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx2-6P43688 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Nkx2-6P43688 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx2-6P43688 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.95■□□□□ 0.46
Nkx2-6P43688 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx2-6P43688 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx2-6P43688 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx2-6P43688 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.94■□□□□ 0.46
Nkx2-6P43688 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx2-6P43688 Gm12527-201ENSMUST00000117967 564 ntBASIC17.94■□□□□ 0.46
Nkx2-6P43688 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx2-6P43688 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.94■□□□□ 0.46
Nkx2-6P43688 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Nkx2-6P43688 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx2-6P43688 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx2-6P43688 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx2-6P43688 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx2-6P43688 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx2-6P43688 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx2-6P43688 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx2-6P43688 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Nkx2-6P43688 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.93■□□□□ 0.46
Nkx2-6P43688 Gm10653-202ENSMUST00000139570 835 ntBASIC17.93■□□□□ 0.46
Nkx2-6P43688 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.93■□□□□ 0.46
Nkx2-6P43688 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx2-6P43688 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx2-6P43688 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx2-6P43688 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Nkx2-6P43688 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.92■□□□□ 0.46
Nkx2-6P43688 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.92■□□□□ 0.46
Nkx2-6P43688 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.92■□□□□ 0.46
Nkx2-6P43688 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Nkx2-6P43688 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkx2-6P43688 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkx2-6P43688 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkx2-6P43688 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Nkx2-6P43688 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkx2-6P43688 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Nkx2-6P43688 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.91■□□□□ 0.46
Nkx2-6P43688 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Nkx2-6P43688 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Nkx2-6P43688 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx2-6P43688 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Nkx2-6P43688 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Nkx2-6P43688 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx2-6P43688 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx2-6P43688 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx2-6P43688 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx2-6P43688 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx2-6P43688 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Nkx2-6P43688 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.9■□□□□ 0.46
Nkx2-6P43688 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx2-6P43688 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx2-6P43688 Gm5408-201ENSMUST00000197998 747 ntBASIC17.9■□□□□ 0.46
Nkx2-6P43688 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx2-6P43688 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx2-6P43688 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx2-6P43688 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx2-6P43688 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx2-6P43688 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx2-6P43688 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx2-6P43688 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx2-6P43688 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx2-6P43688 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx2-6P43688 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
Nkx2-6P43688 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx2-6P43688 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx2-6P43688 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx2-6P43688 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.89■□□□□ 0.45
Nkx2-6P43688 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Nkx2-6P43688 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Nkx2-6P43688 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx2-6P43688 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx2-6P43688 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx2-6P43688 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx2-6P43688 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Nkx2-6P43688 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx2-6P43688 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.88■□□□□ 0.45
Nkx2-6P43688 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx2-6P43688 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx2-6P43688 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx2-6P43688 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx2-6P43688 Gm8520-201ENSMUST00000186517 868 ntBASIC17.88■□□□□ 0.45
Nkx2-6P43688 Gm20049-201ENSMUST00000219950 730 ntBASIC17.88■□□□□ 0.45
Nkx2-6P43688 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.88■□□□□ 0.45
Nkx2-6P43688 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx2-6P43688 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx2-6P43688 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx2-6P43688 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.88■□□□□ 0.45
Nkx2-6P43688 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms