Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hist1h1aP43275 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Hist1h1aP43275 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Hist1h1aP43275 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hist1h1aP43275 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hist1h1aP43275 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
Hist1h1aP43275 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC15.6■□□□□ 0.09
Hist1h1aP43275 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hist1h1aP43275 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Hist1h1aP43275 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC15.6■□□□□ 0.09
Hist1h1aP43275 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Hist1h1aP43275 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Hist1h1aP43275 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hist1h1aP43275 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hist1h1aP43275 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hist1h1aP43275 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.6■□□□□ 0.09
Hist1h1aP43275 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Hist1h1aP43275 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Hist1h1aP43275 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC15.6■□□□□ 0.09
Hist1h1aP43275 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hist1h1aP43275 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Hist1h1aP43275 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Hist1h1aP43275 Gm6627-201ENSMUST00000218299 2386 ntBASIC15.6■□□□□ 0.09
Hist1h1aP43275 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hist1h1aP43275 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hist1h1aP43275 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC15.59■□□□□ 0.09
Hist1h1aP43275 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hist1h1aP43275 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hist1h1aP43275 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hist1h1aP43275 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC15.59■□□□□ 0.09
Hist1h1aP43275 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC15.59■□□□□ 0.09
Hist1h1aP43275 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Hist1h1aP43275 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hist1h1aP43275 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hist1h1aP43275 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Hist1h1aP43275 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hist1h1aP43275 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Hist1h1aP43275 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hist1h1aP43275 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hist1h1aP43275 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hist1h1aP43275 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hist1h1aP43275 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hist1h1aP43275 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hist1h1aP43275 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hist1h1aP43275 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Hist1h1aP43275 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Hist1h1aP43275 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Hist1h1aP43275 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Hist1h1aP43275 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hist1h1aP43275 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hist1h1aP43275 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hist1h1aP43275 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hist1h1aP43275 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hist1h1aP43275 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hist1h1aP43275 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hist1h1aP43275 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hist1h1aP43275 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hist1h1aP43275 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Hist1h1aP43275 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Hist1h1aP43275 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hist1h1aP43275 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hist1h1aP43275 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hist1h1aP43275 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hist1h1aP43275 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hist1h1aP43275 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Hist1h1aP43275 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hist1h1aP43275 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Hist1h1aP43275 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC15.57■□□□□ 0.08
Hist1h1aP43275 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC15.57■□□□□ 0.08
Hist1h1aP43275 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC15.57■□□□□ 0.08
Hist1h1aP43275 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hist1h1aP43275 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
Hist1h1aP43275 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Hist1h1aP43275 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hist1h1aP43275 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC15.57■□□□□ 0.08
Hist1h1aP43275 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hist1h1aP43275 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hist1h1aP43275 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hist1h1aP43275 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hist1h1aP43275 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hist1h1aP43275 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hist1h1aP43275 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Hist1h1aP43275 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC15.56■□□□□ 0.08
Hist1h1aP43275 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC15.56■□□□□ 0.08
Hist1h1aP43275 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Hist1h1aP43275 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Hist1h1aP43275 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hist1h1aP43275 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC15.56■□□□□ 0.08
Hist1h1aP43275 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hist1h1aP43275 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hist1h1aP43275 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hist1h1aP43275 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hist1h1aP43275 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hist1h1aP43275 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hist1h1aP43275 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hist1h1aP43275 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hist1h1aP43275 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hist1h1aP43275 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hist1h1aP43275 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hist1h1aP43275 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms