Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdx2P43241 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cdx2P43241 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdx2P43241 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Cdx2P43241 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdx2P43241 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdx2P43241 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.09■□□□□ 0.49
Cdx2P43241 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdx2P43241 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdx2P43241 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdx2P43241 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cdx2P43241 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cdx2P43241 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cdx2P43241 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Cdx2P43241 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdx2P43241 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdx2P43241 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Cdx2P43241 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.09■□□□□ 0.49
Cdx2P43241 Gm44549-201ENSMUST00000208351 577 ntBASIC18.09■□□□□ 0.49
Cdx2P43241 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cdx2P43241 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdx2P43241 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.09■□□□□ 0.49
Cdx2P43241 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdx2P43241 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdx2P43241 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cdx2P43241 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cdx2P43241 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.08■□□□□ 0.48
Cdx2P43241 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cdx2P43241 Gm11249-201ENSMUST00000117071 859 ntBASIC18.08■□□□□ 0.48
Cdx2P43241 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cdx2P43241 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cdx2P43241 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.08■□□□□ 0.48
Cdx2P43241 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.08■□□□□ 0.48
Cdx2P43241 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cdx2P43241 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cdx2P43241 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cdx2P43241 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cdx2P43241 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cdx2P43241 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Cdx2P43241 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdx2P43241 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.07■□□□□ 0.48
Cdx2P43241 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdx2P43241 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdx2P43241 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.07■□□□□ 0.48
Cdx2P43241 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdx2P43241 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
Cdx2P43241 Gm13836-201ENSMUST00000121159 501 ntBASIC18.07■□□□□ 0.48
Cdx2P43241 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Cdx2P43241 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.07■□□□□ 0.48
Cdx2P43241 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdx2P43241 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Cdx2P43241 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Cdx2P43241 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdx2P43241 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.06■□□□□ 0.48
Cdx2P43241 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdx2P43241 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdx2P43241 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.06■□□□□ 0.48
Cdx2P43241 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Cdx2P43241 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdx2P43241 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdx2P43241 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.05■□□□□ 0.48
Cdx2P43241 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.05■□□□□ 0.48
Cdx2P43241 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdx2P43241 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cdx2P43241 Gm715-201ENSMUST00000117865 831 ntBASIC18.05■□□□□ 0.48
Cdx2P43241 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Cdx2P43241 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cdx2P43241 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.05■□□□□ 0.48
Cdx2P43241 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.05■□□□□ 0.48
Cdx2P43241 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cdx2P43241 Gm18666-201ENSMUST00000190039 958 ntBASIC18.05■□□□□ 0.48
Cdx2P43241 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cdx2P43241 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdx2P43241 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdx2P43241 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdx2P43241 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdx2P43241 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cdx2P43241 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.04■□□□□ 0.48
Cdx2P43241 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
Cdx2P43241 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdx2P43241 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdx2P43241 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Cdx2P43241 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.04■□□□□ 0.48
Cdx2P43241 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cdx2P43241 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Cdx2P43241 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdx2P43241 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdx2P43241 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdx2P43241 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdx2P43241 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdx2P43241 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdx2P43241 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdx2P43241 Gm2399-201ENSMUST00000104944 225 ntBASIC18.03■□□□□ 0.48
Cdx2P43241 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.03■□□□□ 0.48
Cdx2P43241 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.03■□□□□ 0.48
Cdx2P43241 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.03■□□□□ 0.48
Cdx2P43241 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Cdx2P43241 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.03■□□□□ 0.48
Cdx2P43241 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdx2P43241 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms