Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx2-2P42586 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Nkx2-2P42586 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.44■□□□□ 0.38
Nkx2-2P42586 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx2-2P42586 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx2-2P42586 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx2-2P42586 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx2-2P42586 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
Nkx2-2P42586 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx2-2P42586 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Nkx2-2P42586 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Nkx2-2P42586 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx2-2P42586 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.43■□□□□ 0.38
Nkx2-2P42586 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx2-2P42586 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Nkx2-2P42586 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.43■□□□□ 0.38
Nkx2-2P42586 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.43■□□□□ 0.38
Nkx2-2P42586 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx2-2P42586 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Nkx2-2P42586 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Nkx2-2P42586 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx2-2P42586 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Nkx2-2P42586 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx2-2P42586 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx2-2P42586 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.42■□□□□ 0.38
Nkx2-2P42586 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx2-2P42586 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.42■□□□□ 0.38
Nkx2-2P42586 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx2-2P42586 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx2-2P42586 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.42■□□□□ 0.38
Nkx2-2P42586 Gm10493-201ENSMUST00000097270 612 ntBASIC17.42■□□□□ 0.38
Nkx2-2P42586 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx2-2P42586 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx2-2P42586 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx2-2P42586 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx2-2P42586 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-2P42586 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-2P42586 Reep4-203ENSMUST00000226563 1444 ntBASIC17.41■□□□□ 0.38
Nkx2-2P42586 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-2P42586 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-2P42586 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-2P42586 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Nkx2-2P42586 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-2P42586 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.41■□□□□ 0.38
Nkx2-2P42586 BC021767-201ENSMUST00000126387 1716 ntBASIC17.41■□□□□ 0.38
Nkx2-2P42586 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-2P42586 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx2-2P42586 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx2-2P42586 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.4■□□□□ 0.38
Nkx2-2P42586 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx2-2P42586 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.4■□□□□ 0.38
Nkx2-2P42586 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx2-2P42586 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.4■□□□□ 0.38
Nkx2-2P42586 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx2-2P42586 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.4■□□□□ 0.38
Nkx2-2P42586 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Nkx2-2P42586 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx2-2P42586 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx2-2P42586 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx2-2P42586 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx2-2P42586 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx2-2P42586 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx2-2P42586 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.4■□□□□ 0.38
Nkx2-2P42586 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.4■□□□□ 0.38
Nkx2-2P42586 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx2-2P42586 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Nkx2-2P42586 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Nkx2-2P42586 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Nkx2-2P42586 Gm13146-201ENSMUST00000118508 780 ntBASIC17.39■□□□□ 0.37
Nkx2-2P42586 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx2-2P42586 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.39■□□□□ 0.37
Nkx2-2P42586 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx2-2P42586 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx2-2P42586 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx2-2P42586 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx2-2P42586 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx2-2P42586 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Nkx2-2P42586 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Nkx2-2P42586 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx2-2P42586 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx2-2P42586 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx2-2P42586 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.38■□□□□ 0.37
Nkx2-2P42586 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.38■□□□□ 0.37
Nkx2-2P42586 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx2-2P42586 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx2-2P42586 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx2-2P42586 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx2-2P42586 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx2-2P42586 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx2-2P42586 Gm13234-201ENSMUST00000120010 747 ntBASIC17.37■□□□□ 0.37
Nkx2-2P42586 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.37■□□□□ 0.37
Nkx2-2P42586 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx2-2P42586 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.37■□□□□ 0.37
Nkx2-2P42586 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx2-2P42586 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx2-2P42586 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx2-2P42586 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx2-2P42586 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx2-2P42586 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx2-2P42586 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms