Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Cd9P40240 Gm38205-201ENSMUST00000192243 258 ntBASIC18.8■□□□□ 0.6
Cd9P40240 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
Cd9P40240 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cd9P40240 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cd9P40240 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cd9P40240 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cd9P40240 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cd9P40240 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Cd9P40240 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cd9P40240 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cd9P40240 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cd9P40240 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cd9P40240 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cd9P40240 Gm13146-201ENSMUST00000118508 780 ntBASIC18.79■□□□□ 0.6
Cd9P40240 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.79■□□□□ 0.6
Cd9P40240 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.79■□□□□ 0.6
Cd9P40240 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cd9P40240 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cd9P40240 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cd9P40240 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cd9P40240 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cd9P40240 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Cd9P40240 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cd9P40240 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cd9P40240 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cd9P40240 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cd9P40240 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cd9P40240 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Cd9P40240 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Cd9P40240 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cd9P40240 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cd9P40240 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cd9P40240 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.78■□□□□ 0.6
Cd9P40240 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cd9P40240 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cd9P40240 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Cd9P40240 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cd9P40240 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cd9P40240 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cd9P40240 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Cd9P40240 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cd9P40240 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cd9P40240 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cd9P40240 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cd9P40240 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.77■□□□□ 0.6
Cd9P40240 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.77■□□□□ 0.6
Cd9P40240 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cd9P40240 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cd9P40240 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cd9P40240 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cd9P40240 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cd9P40240 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cd9P40240 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.76■□□□□ 0.59
Cd9P40240 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Cd9P40240 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cd9P40240 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.76■□□□□ 0.59
Cd9P40240 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cd9P40240 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cd9P40240 Golph3-205ENSMUST00000228671 2842 ntBASIC18.76■□□□□ 0.59
Cd9P40240 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cd9P40240 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cd9P40240 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cd9P40240 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cd9P40240 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cd9P40240 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cd9P40240 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cd9P40240 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cd9P40240 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Cd9P40240 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.75■□□□□ 0.59
Cd9P40240 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cd9P40240 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
Cd9P40240 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Cd9P40240 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cd9P40240 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Cd9P40240 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Cd9P40240 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.74■□□□□ 0.59
Cd9P40240 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Cd9P40240 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cd9P40240 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cd9P40240 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.74■□□□□ 0.59
Cd9P40240 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.74■□□□□ 0.59
Cd9P40240 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.74■□□□□ 0.59
Cd9P40240 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Cd9P40240 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cd9P40240 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cd9P40240 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cd9P40240 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cd9P40240 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cd9P40240 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cd9P40240 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cd9P40240 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cd9P40240 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Cd9P40240 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.73■□□□□ 0.59
Cd9P40240 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Cd9P40240 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cd9P40240 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cd9P40240 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cd9P40240 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cd9P40240 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms