Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LdlrP35951 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LdlrP35951 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.84■□□□□ 0.61
LdlrP35951 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LdlrP35951 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
LdlrP35951 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LdlrP35951 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
LdlrP35951 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LdlrP35951 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
LdlrP35951 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LdlrP35951 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
LdlrP35951 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LdlrP35951 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
LdlrP35951 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
LdlrP35951 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LdlrP35951 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LdlrP35951 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
LdlrP35951 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LdlrP35951 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LdlrP35951 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LdlrP35951 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.82■□□□□ 0.6
LdlrP35951 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LdlrP35951 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LdlrP35951 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LdlrP35951 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.82■□□□□ 0.6
LdlrP35951 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LdlrP35951 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LdlrP35951 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LdlrP35951 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LdlrP35951 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.82■□□□□ 0.6
LdlrP35951 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LdlrP35951 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
LdlrP35951 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LdlrP35951 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LdlrP35951 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LdlrP35951 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LdlrP35951 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LdlrP35951 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LdlrP35951 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LdlrP35951 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.81■□□□□ 0.6
LdlrP35951 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.81■□□□□ 0.6
LdlrP35951 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LdlrP35951 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LdlrP35951 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LdlrP35951 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LdlrP35951 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LdlrP35951 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
LdlrP35951 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.8■□□□□ 0.6
LdlrP35951 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LdlrP35951 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LdlrP35951 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LdlrP35951 Gm43173-201ENSMUST00000202246 593 ntBASIC18.8■□□□□ 0.6
LdlrP35951 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LdlrP35951 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LdlrP35951 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LdlrP35951 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
LdlrP35951 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LdlrP35951 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
LdlrP35951 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LdlrP35951 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LdlrP35951 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LdlrP35951 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LdlrP35951 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.79■□□□□ 0.6
LdlrP35951 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.79■□□□□ 0.6
LdlrP35951 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.79■□□□□ 0.6
LdlrP35951 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LdlrP35951 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LdlrP35951 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LdlrP35951 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LdlrP35951 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.78■□□□□ 0.6
LdlrP35951 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LdlrP35951 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LdlrP35951 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LdlrP35951 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LdlrP35951 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LdlrP35951 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.78■□□□□ 0.6
LdlrP35951 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.78■□□□□ 0.6
LdlrP35951 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LdlrP35951 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LdlrP35951 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LdlrP35951 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.78■□□□□ 0.6
LdlrP35951 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.78■□□□□ 0.6
LdlrP35951 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
LdlrP35951 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LdlrP35951 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.77■□□□□ 0.6
LdlrP35951 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LdlrP35951 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
LdlrP35951 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.59
LdlrP35951 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LdlrP35951 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LdlrP35951 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LdlrP35951 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LdlrP35951 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LdlrP35951 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.76■□□□□ 0.59
LdlrP35951 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
LdlrP35951 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LdlrP35951 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LdlrP35951 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.76■□□□□ 0.59
LdlrP35951 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
LdlrP35951 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms