Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Mmp13P33435 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Mmp13P33435 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Mmp13P33435 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Mmp13P33435 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Mmp13P33435 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Mmp13P33435 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Mmp13P33435 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Mmp13P33435 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Mmp13P33435 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Mmp13P33435 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Mmp13P33435 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Mmp13P33435 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Mmp13P33435 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Mmp13P33435 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.36■□□□□ 0.69
Mmp13P33435 Gm43173-201ENSMUST00000202246 593 ntBASIC19.36■□□□□ 0.69
Mmp13P33435 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
Mmp13P33435 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Mmp13P33435 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Mmp13P33435 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Mmp13P33435 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Mmp13P33435 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mmp13P33435 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Mmp13P33435 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mmp13P33435 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mmp13P33435 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mmp13P33435 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Mmp13P33435 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mmp13P33435 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mmp13P33435 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mmp13P33435 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.35■□□□□ 0.69
Mmp13P33435 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mmp13P33435 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.35■□□□□ 0.69
Mmp13P33435 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mmp13P33435 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mmp13P33435 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Mmp13P33435 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mmp13P33435 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mmp13P33435 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mmp13P33435 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mmp13P33435 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mmp13P33435 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
Mmp13P33435 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Mmp13P33435 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Mmp13P33435 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Mmp13P33435 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Mmp13P33435 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Mmp13P33435 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.34■□□□□ 0.69
Mmp13P33435 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Mmp13P33435 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Mmp13P33435 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.34■□□□□ 0.69
Mmp13P33435 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.34■□□□□ 0.69
Mmp13P33435 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Mmp13P33435 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Mmp13P33435 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Mmp13P33435 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Mmp13P33435 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.34■□□□□ 0.69
Mmp13P33435 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Mmp13P33435 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.34■□□□□ 0.69
Mmp13P33435 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Mmp13P33435 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Mmp13P33435 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Mmp13P33435 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Mmp13P33435 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Mmp13P33435 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.68
Mmp13P33435 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.33■□□□□ 0.68
Mmp13P33435 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
Mmp13P33435 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.33■□□□□ 0.68
Mmp13P33435 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Mmp13P33435 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Mmp13P33435 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.33■□□□□ 0.68
Mmp13P33435 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Mmp13P33435 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Mmp13P33435 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Mmp13P33435 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Mmp13P33435 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.33■□□□□ 0.68
Mmp13P33435 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mmp13P33435 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mmp13P33435 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mmp13P33435 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mmp13P33435 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Mmp13P33435 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mmp13P33435 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Mmp13P33435 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.32■□□□□ 0.68
Mmp13P33435 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.32■□□□□ 0.68
Mmp13P33435 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mmp13P33435 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.32■□□□□ 0.68
Mmp13P33435 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mmp13P33435 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mmp13P33435 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mmp13P33435 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Mmp13P33435 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.31■□□□□ 0.68
Mmp13P33435 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mmp13P33435 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Mmp13P33435 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.31■□□□□ 0.68
Mmp13P33435 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Mmp13P33435 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Mmp13P33435 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.31■□□□□ 0.68
Mmp13P33435 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Mmp13P33435 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms