Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Nfkb1P25799 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
Nfkb1P25799 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Nfkb1P25799 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nfkb1P25799 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nfkb1P25799 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nfkb1P25799 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.48■□□□□ 0.71
Nfkb1P25799 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nfkb1P25799 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nfkb1P25799 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nfkb1P25799 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nfkb1P25799 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nfkb1P25799 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nfkb1P25799 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nfkb1P25799 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nfkb1P25799 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nfkb1P25799 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.47■□□□□ 0.71
Nfkb1P25799 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.47■□□□□ 0.71
Nfkb1P25799 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.47■□□□□ 0.71
Nfkb1P25799 Gm4968-201ENSMUST00000071458 858 ntBASIC19.47■□□□□ 0.71
Nfkb1P25799 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nfkb1P25799 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Nfkb1P25799 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nfkb1P25799 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nfkb1P25799 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nfkb1P25799 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nfkb1P25799 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Nfkb1P25799 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nfkb1P25799 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.46■□□□□ 0.71
Nfkb1P25799 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Nfkb1P25799 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nfkb1P25799 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Nfkb1P25799 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
Nfkb1P25799 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Nfkb1P25799 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Nfkb1P25799 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nfkb1P25799 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nfkb1P25799 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nfkb1P25799 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nfkb1P25799 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nfkb1P25799 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.46■□□□□ 0.71
Nfkb1P25799 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Nfkb1P25799 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nfkb1P25799 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Nfkb1P25799 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nfkb1P25799 Gm6211-202ENSMUST00000167849 925 ntBASIC19.45■□□□□ 0.7
Nfkb1P25799 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nfkb1P25799 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nfkb1P25799 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nfkb1P25799 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nfkb1P25799 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nfkb1P25799 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.44■□□□□ 0.7
Nfkb1P25799 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.44■□□□□ 0.7
Nfkb1P25799 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nfkb1P25799 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Nfkb1P25799 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Nfkb1P25799 Gm5408-201ENSMUST00000197998 747 ntBASIC19.44■□□□□ 0.7
Nfkb1P25799 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nfkb1P25799 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nfkb1P25799 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Nfkb1P25799 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nfkb1P25799 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nfkb1P25799 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Nfkb1P25799 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nfkb1P25799 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nfkb1P25799 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nfkb1P25799 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nfkb1P25799 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Nfkb1P25799 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nfkb1P25799 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Nfkb1P25799 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
Nfkb1P25799 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.43■□□□□ 0.7
Nfkb1P25799 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nfkb1P25799 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nfkb1P25799 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Nfkb1P25799 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nfkb1P25799 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nfkb1P25799 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.42■□□□□ 0.7
Nfkb1P25799 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nfkb1P25799 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nfkb1P25799 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nfkb1P25799 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nfkb1P25799 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nfkb1P25799 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Nfkb1P25799 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Nfkb1P25799 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nfkb1P25799 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nfkb1P25799 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nfkb1P25799 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nfkb1P25799 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nfkb1P25799 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Nfkb1P25799 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nfkb1P25799 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nfkb1P25799 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.41■□□□□ 0.7
Nfkb1P25799 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Nfkb1P25799 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nfkb1P25799 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Nfkb1P25799 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nfkb1P25799 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.41■□□□□ 0.7
Nfkb1P25799 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms