Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC15.88■□□□□ 0.13
Col8a2P25318 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Col8a2P25318 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col8a2P25318 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC15.88■□□□□ 0.13
Col8a2P25318 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col8a2P25318 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col8a2P25318 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col8a2P25318 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Col8a2P25318 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col8a2P25318 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col8a2P25318 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Col8a2P25318 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col8a2P25318 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col8a2P25318 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Col8a2P25318 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col8a2P25318 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col8a2P25318 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
Col8a2P25318 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col8a2P25318 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC15.87■□□□□ 0.13
Col8a2P25318 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Col8a2P25318 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col8a2P25318 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC15.86■□□□□ 0.13
Col8a2P25318 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Col8a2P25318 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col8a2P25318 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col8a2P25318 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col8a2P25318 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col8a2P25318 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC15.86■□□□□ 0.13
Col8a2P25318 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col8a2P25318 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col8a2P25318 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Col8a2P25318 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col8a2P25318 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col8a2P25318 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC15.85■□□□□ 0.13
Col8a2P25318 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC15.85■□□□□ 0.13
Col8a2P25318 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
Col8a2P25318 CT025689.6-201ENSMUST00000224991 1104 ntBASIC15.85■□□□□ 0.13
Col8a2P25318 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
Col8a2P25318 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Col8a2P25318 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC15.85■□□□□ 0.13
Col8a2P25318 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Col8a2P25318 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col8a2P25318 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col8a2P25318 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC15.85■□□□□ 0.13
Col8a2P25318 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Col8a2P25318 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col8a2P25318 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Col8a2P25318 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col8a2P25318 Gm42555-201ENSMUST00000199304 1039 ntBASIC15.84■□□□□ 0.13
Col8a2P25318 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC15.84■□□□□ 0.13
Col8a2P25318 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col8a2P25318 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col8a2P25318 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Col8a2P25318 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Col8a2P25318 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Col8a2P25318 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Col8a2P25318 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col8a2P25318 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col8a2P25318 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col8a2P25318 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC15.83■□□□□ 0.12
Col8a2P25318 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Col8a2P25318 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Col8a2P25318 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Col8a2P25318 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col8a2P25318 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
Col8a2P25318 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Col8a2P25318 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col8a2P25318 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Col8a2P25318 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Col8a2P25318 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col8a2P25318 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Col8a2P25318 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
Col8a2P25318 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col8a2P25318 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col8a2P25318 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col8a2P25318 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col8a2P25318 Gm5297-201ENSMUST00000198555 1171 ntBASIC15.82■□□□□ 0.12
Col8a2P25318 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Col8a2P25318 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col8a2P25318 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col8a2P25318 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col8a2P25318 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col8a2P25318 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Col8a2P25318 Gm13148-201ENSMUST00000118892 745 ntBASIC15.81■□□□□ 0.12
Col8a2P25318 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC15.81■□□□□ 0.12
Col8a2P25318 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC15.81■□□□□ 0.12
Col8a2P25318 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Col8a2P25318 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col8a2P25318 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col8a2P25318 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col8a2P25318 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col8a2P25318 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col8a2P25318 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col8a2P25318 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Col8a2P25318 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col8a2P25318 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Col8a2P25318 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col8a2P25318 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.8■□□□□ 0.12
Col8a2P25318 Gm10655-201ENSMUST00000098658 1397 ntBASIC15.8■□□□□ 0.12
Col8a2P25318 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms