Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pde6bP23440 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Pde6bP23440 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pde6bP23440 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Pde6bP23440 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pde6bP23440 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pde6bP23440 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pde6bP23440 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pde6bP23440 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pde6bP23440 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pde6bP23440 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Pde6bP23440 Gm6211-202ENSMUST00000167849 925 ntBASIC20.62■□□□□ 0.89
Pde6bP23440 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pde6bP23440 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Pde6bP23440 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pde6bP23440 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.62■□□□□ 0.89
Pde6bP23440 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.62■□□□□ 0.89
Pde6bP23440 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pde6bP23440 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Pde6bP23440 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pde6bP23440 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.61■□□□□ 0.89
Pde6bP23440 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pde6bP23440 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pde6bP23440 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Pde6bP23440 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.61■□□□□ 0.89
Pde6bP23440 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pde6bP23440 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pde6bP23440 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pde6bP23440 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pde6bP23440 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pde6bP23440 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pde6bP23440 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pde6bP23440 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Pde6bP23440 Gm12527-201ENSMUST00000117967 564 ntBASIC20.6■□□□□ 0.89
Pde6bP23440 Gm7860-201ENSMUST00000121190 879 ntBASIC20.6■□□□□ 0.89
Pde6bP23440 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Pde6bP23440 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pde6bP23440 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Pde6bP23440 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pde6bP23440 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pde6bP23440 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pde6bP23440 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
Pde6bP23440 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.59■□□□□ 0.89
Pde6bP23440 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pde6bP23440 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pde6bP23440 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pde6bP23440 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pde6bP23440 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Pde6bP23440 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.59■□□□□ 0.89
Pde6bP23440 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Pde6bP23440 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pde6bP23440 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.58■□□□□ 0.89
Pde6bP23440 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Pde6bP23440 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pde6bP23440 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pde6bP23440 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.58■□□□□ 0.89
Pde6bP23440 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
Pde6bP23440 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Pde6bP23440 Gm22240-201ENSMUST00000175225 82 ntBASIC20.58■□□□□ 0.89
Pde6bP23440 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Pde6bP23440 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Pde6bP23440 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pde6bP23440 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pde6bP23440 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pde6bP23440 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Pde6bP23440 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pde6bP23440 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.57■□□□□ 0.88
Pde6bP23440 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Pde6bP23440 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.57■□□□□ 0.88
Pde6bP23440 Gm8520-201ENSMUST00000186517 868 ntBASIC20.57■□□□□ 0.88
Pde6bP23440 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.57■□□□□ 0.88
Pde6bP23440 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pde6bP23440 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pde6bP23440 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Pde6bP23440 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.56■□□□□ 0.88
Pde6bP23440 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pde6bP23440 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pde6bP23440 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.56■□□□□ 0.88
Pde6bP23440 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pde6bP23440 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pde6bP23440 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pde6bP23440 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pde6bP23440 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pde6bP23440 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pde6bP23440 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pde6bP23440 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pde6bP23440 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pde6bP23440 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pde6bP23440 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pde6bP23440 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Pde6bP23440 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pde6bP23440 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Pde6bP23440 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Pde6bP23440 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.55■□□□□ 0.88
Pde6bP23440 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pde6bP23440 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.55■□□□□ 0.88
Pde6bP23440 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pde6bP23440 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pde6bP23440 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pde6bP23440 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms