Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Tnfrsf9P20334 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Tnfrsf9P20334 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Tnfrsf9P20334 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tnfrsf9P20334 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC15.33■□□□□ 0.04
Tnfrsf9P20334 Gm22325-201ENSMUST00000158904 308 ntBASIC15.33■□□□□ 0.04
Tnfrsf9P20334 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tnfrsf9P20334 Gm4968-201ENSMUST00000071458 858 ntBASIC15.33■□□□□ 0.04
Tnfrsf9P20334 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tnfrsf9P20334 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tnfrsf9P20334 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
Tnfrsf9P20334 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tnfrsf9P20334 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf9P20334 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf9P20334 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Tnfrsf9P20334 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf9P20334 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf9P20334 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf9P20334 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf9P20334 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf9P20334 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Tnfrsf9P20334 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Tnfrsf9P20334 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf9P20334 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf9P20334 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf9P20334 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Tnfrsf9P20334 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf9P20334 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf9P20334 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf9P20334 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf9P20334 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf9P20334 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Tnfrsf9P20334 Dapk1-207ENSMUST00000226059 5009 ntBASIC15.31■□□□□ 0.04
Tnfrsf9P20334 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf9P20334 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf9P20334 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf9P20334 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf9P20334 Gm3807-201ENSMUST00000193520 1168 ntBASIC15.31■□□□□ 0.04
Tnfrsf9P20334 Gm42555-201ENSMUST00000199304 1039 ntBASIC15.31■□□□□ 0.04
Tnfrsf9P20334 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC15.31■□□□□ 0.04
Tnfrsf9P20334 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf9P20334 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf9P20334 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf9P20334 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf9P20334 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf9P20334 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC15.31■□□□□ 0.04
Tnfrsf9P20334 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf9P20334 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf9P20334 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf9P20334 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf9P20334 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf9P20334 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf9P20334 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf9P20334 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf9P20334 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf9P20334 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf9P20334 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC15.3■□□□□ 0.04
Tnfrsf9P20334 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC15.3■□□□□ 0.04
Tnfrsf9P20334 Gm20760-201ENSMUST00000179197 648 ntBASIC15.3■□□□□ 0.04
Tnfrsf9P20334 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC15.3■□□□□ 0.04
Tnfrsf9P20334 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf9P20334 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf9P20334 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Tnfrsf9P20334 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf9P20334 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf9P20334 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf9P20334 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf9P20334 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf9P20334 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf9P20334 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf9P20334 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC15.29■□□□□ 0.04
Tnfrsf9P20334 Gm12527-201ENSMUST00000117967 564 ntBASIC15.29■□□□□ 0.04
Tnfrsf9P20334 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Tnfrsf9P20334 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf9P20334 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Tnfrsf9P20334 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf9P20334 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf9P20334 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf9P20334 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Tnfrsf9P20334 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf9P20334 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf9P20334 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Tnfrsf9P20334 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf9P20334 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf9P20334 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf9P20334 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf9P20334 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.28■□□□□ 0.04
Tnfrsf9P20334 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf9P20334 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf9P20334 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf9P20334 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf9P20334 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf9P20334 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf9P20334 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC15.28■□□□□ 0.04
Tnfrsf9P20334 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf9P20334 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC15.28■□□□□ 0.04
Tnfrsf9P20334 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Tnfrsf9P20334 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf9P20334 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf9P20334 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms