Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rb1P13405 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rb1P13405 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Rb1P13405 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rb1P13405 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rb1P13405 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Rb1P13405 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rb1P13405 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rb1P13405 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rb1P13405 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rb1P13405 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.22■□□□□ 0.67
Rb1P13405 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rb1P13405 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rb1P13405 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rb1P13405 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rb1P13405 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rb1P13405 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rb1P13405 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Rb1P13405 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rb1P13405 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rb1P13405 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rb1P13405 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rb1P13405 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rb1P13405 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rb1P13405 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.21■□□□□ 0.67
Rb1P13405 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.21■□□□□ 0.67
Rb1P13405 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rb1P13405 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rb1P13405 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.21■□□□□ 0.67
Rb1P13405 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rb1P13405 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rb1P13405 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rb1P13405 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Rb1P13405 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rb1P13405 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.2■□□□□ 0.66
Rb1P13405 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rb1P13405 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rb1P13405 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.2■□□□□ 0.66
Rb1P13405 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.2■□□□□ 0.66
Rb1P13405 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rb1P13405 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
Rb1P13405 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rb1P13405 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rb1P13405 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rb1P13405 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rb1P13405 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rb1P13405 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rb1P13405 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rb1P13405 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rb1P13405 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rb1P13405 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rb1P13405 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rb1P13405 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.19■□□□□ 0.66
Rb1P13405 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.19■□□□□ 0.66
Rb1P13405 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.19■□□□□ 0.66
Rb1P13405 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.19■□□□□ 0.66
Rb1P13405 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Rb1P13405 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rb1P13405 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rb1P13405 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.19■□□□□ 0.66
Rb1P13405 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rb1P13405 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rb1P13405 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rb1P13405 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Rb1P13405 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.18■□□□□ 0.66
Rb1P13405 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rb1P13405 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Rb1P13405 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Rb1P13405 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rb1P13405 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.18■□□□□ 0.66
Rb1P13405 Nespas-201ENSMUST00000143738 1083 ntBASIC19.18■□□□□ 0.66
Rb1P13405 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rb1P13405 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.18■□□□□ 0.66
Rb1P13405 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rb1P13405 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Rb1P13405 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rb1P13405 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Rb1P13405 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rb1P13405 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rb1P13405 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rb1P13405 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rb1P13405 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rb1P13405 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rb1P13405 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rb1P13405 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rb1P13405 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rb1P13405 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rb1P13405 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rb1P13405 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rb1P13405 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rb1P13405 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rb1P13405 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rb1P13405 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Rb1P13405 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rb1P13405 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.16■□□□□ 0.66
Rb1P13405 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rb1P13405 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rb1P13405 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rb1P13405 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rb1P13405 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms