Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cntn1P12960 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cntn1P12960 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cntn1P12960 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.19■□□□□ 0.5
Cntn1P12960 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cntn1P12960 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cntn1P12960 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cntn1P12960 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.18■□□□□ 0.5
Cntn1P12960 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Cntn1P12960 Gm6420-201ENSMUST00000193885 723 ntBASIC18.18■□□□□ 0.5
Cntn1P12960 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.18■□□□□ 0.5
Cntn1P12960 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
Cntn1P12960 Gm10602-201ENSMUST00000098239 609 ntBASIC18.18■□□□□ 0.5
Cntn1P12960 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Cntn1P12960 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cntn1P12960 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cntn1P12960 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cntn1P12960 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.17■□□□□ 0.5
Cntn1P12960 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.17■□□□□ 0.5
Cntn1P12960 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cntn1P12960 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cntn1P12960 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.17■□□□□ 0.5
Cntn1P12960 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Cntn1P12960 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Cntn1P12960 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Cntn1P12960 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cntn1P12960 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cntn1P12960 Gm12933-201ENSMUST00000120203 872 ntBASIC18.16■□□□□ 0.5
Cntn1P12960 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cntn1P12960 Nespas-201ENSMUST00000143738 1083 ntBASIC18.16■□□□□ 0.5
Cntn1P12960 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Cntn1P12960 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cntn1P12960 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cntn1P12960 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cntn1P12960 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cntn1P12960 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cntn1P12960 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.15■□□□□ 0.5
Cntn1P12960 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.15■□□□□ 0.5
Cntn1P12960 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cntn1P12960 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Cntn1P12960 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cntn1P12960 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cntn1P12960 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cntn1P12960 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cntn1P12960 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cntn1P12960 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cntn1P12960 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Cntn1P12960 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.14■□□□□ 0.49
Cntn1P12960 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Cntn1P12960 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.13■□□□□ 0.49
Cntn1P12960 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cntn1P12960 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cntn1P12960 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Cntn1P12960 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cntn1P12960 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cntn1P12960 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cntn1P12960 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cntn1P12960 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cntn1P12960 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cntn1P12960 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Cntn1P12960 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
Cntn1P12960 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cntn1P12960 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cntn1P12960 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Cntn1P12960 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cntn1P12960 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Cntn1P12960 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.12■□□□□ 0.49
Cntn1P12960 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.12■□□□□ 0.49
Cntn1P12960 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cntn1P12960 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Cntn1P12960 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Cntn1P12960 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cntn1P12960 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cntn1P12960 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cntn1P12960 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.11■□□□□ 0.49
Cntn1P12960 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cntn1P12960 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cntn1P12960 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cntn1P12960 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cntn1P12960 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.11■□□□□ 0.49
Cntn1P12960 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Cntn1P12960 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cntn1P12960 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cntn1P12960 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.11■□□□□ 0.49
Cntn1P12960 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cntn1P12960 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Cntn1P12960 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cntn1P12960 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cntn1P12960 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cntn1P12960 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cntn1P12960 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cntn1P12960 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cntn1P12960 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cntn1P12960 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.1■□□□□ 0.49
Cntn1P12960 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.1■□□□□ 0.49
Cntn1P12960 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cntn1P12960 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cntn1P12960 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Cntn1P12960 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cntn1P12960 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms