Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ApoeP08226 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ApoeP08226 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ApoeP08226 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.92■□□□□ 0.46
ApoeP08226 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ApoeP08226 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
ApoeP08226 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
ApoeP08226 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ApoeP08226 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
ApoeP08226 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ApoeP08226 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ApoeP08226 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ApoeP08226 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ApoeP08226 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.91■□□□□ 0.46
ApoeP08226 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC17.91■□□□□ 0.46
ApoeP08226 Gm7417-201ENSMUST00000192950 473 ntBASIC17.91■□□□□ 0.46
ApoeP08226 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.91■□□□□ 0.46
ApoeP08226 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.91■□□□□ 0.46
ApoeP08226 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.91■□□□□ 0.46
ApoeP08226 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ApoeP08226 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
ApoeP08226 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ApoeP08226 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
ApoeP08226 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ApoeP08226 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ApoeP08226 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.91■□□□□ 0.46
ApoeP08226 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
ApoeP08226 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ApoeP08226 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ApoeP08226 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ApoeP08226 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.9■□□□□ 0.46
ApoeP08226 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ApoeP08226 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ApoeP08226 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ApoeP08226 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ApoeP08226 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ApoeP08226 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ApoeP08226 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ApoeP08226 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ApoeP08226 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.9■□□□□ 0.46
ApoeP08226 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.9■□□□□ 0.46
ApoeP08226 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ApoeP08226 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ApoeP08226 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
ApoeP08226 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
ApoeP08226 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
ApoeP08226 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ApoeP08226 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
ApoeP08226 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ApoeP08226 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ApoeP08226 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.89■□□□□ 0.45
ApoeP08226 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ApoeP08226 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ApoeP08226 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ApoeP08226 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
ApoeP08226 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
ApoeP08226 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ApoeP08226 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ApoeP08226 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ApoeP08226 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ApoeP08226 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.89■□□□□ 0.45
ApoeP08226 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ApoeP08226 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ApoeP08226 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ApoeP08226 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.88■□□□□ 0.45
ApoeP08226 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.88■□□□□ 0.45
ApoeP08226 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ApoeP08226 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
ApoeP08226 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ApoeP08226 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ApoeP08226 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ApoeP08226 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.88■□□□□ 0.45
ApoeP08226 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ApoeP08226 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ApoeP08226 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ApoeP08226 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.88■□□□□ 0.45
ApoeP08226 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
ApoeP08226 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
ApoeP08226 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
ApoeP08226 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ApoeP08226 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ApoeP08226 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
ApoeP08226 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ApoeP08226 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ApoeP08226 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ApoeP08226 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ApoeP08226 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
ApoeP08226 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.87■□□□□ 0.45
ApoeP08226 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ApoeP08226 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ApoeP08226 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ApoeP08226 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ApoeP08226 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ApoeP08226 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
ApoeP08226 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ApoeP08226 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ApoeP08226 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
ApoeP08226 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ApoeP08226 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ApoeP08226 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms