Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
H3f3cP02301 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
H3f3cP02301 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
H3f3cP02301 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
H3f3cP02301 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
H3f3cP02301 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
H3f3cP02301 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
H3f3cP02301 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
H3f3cP02301 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
H3f3cP02301 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
H3f3cP02301 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
H3f3cP02301 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.21■□□□□ 0.19
H3f3cP02301 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
H3f3cP02301 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC16.21■□□□□ 0.19
H3f3cP02301 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
H3f3cP02301 Gm10493-201ENSMUST00000097270 612 ntBASIC16.21■□□□□ 0.19
H3f3cP02301 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
H3f3cP02301 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
H3f3cP02301 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
H3f3cP02301 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
H3f3cP02301 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
H3f3cP02301 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.21■□□□□ 0.18
H3f3cP02301 Gm10129-202ENSMUST00000193100 1316 ntBASIC16.2■□□□□ 0.18
H3f3cP02301 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
H3f3cP02301 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
H3f3cP02301 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
H3f3cP02301 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
H3f3cP02301 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
H3f3cP02301 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC16.2■□□□□ 0.18
H3f3cP02301 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
H3f3cP02301 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.2■□□□□ 0.18
H3f3cP02301 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
H3f3cP02301 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.2■□□□□ 0.18
H3f3cP02301 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
H3f3cP02301 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
H3f3cP02301 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.2■□□□□ 0.18
H3f3cP02301 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
H3f3cP02301 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
H3f3cP02301 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
H3f3cP02301 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
H3f3cP02301 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
H3f3cP02301 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
H3f3cP02301 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.19■□□□□ 0.18
H3f3cP02301 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
H3f3cP02301 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.19■□□□□ 0.18
H3f3cP02301 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.19■□□□□ 0.18
H3f3cP02301 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.19■□□□□ 0.18
H3f3cP02301 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.19■□□□□ 0.18
H3f3cP02301 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
H3f3cP02301 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
H3f3cP02301 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
H3f3cP02301 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
H3f3cP02301 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
H3f3cP02301 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
H3f3cP02301 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
H3f3cP02301 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
H3f3cP02301 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.18■□□□□ 0.18
H3f3cP02301 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
H3f3cP02301 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H3f3cP02301 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
H3f3cP02301 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H3f3cP02301 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
H3f3cP02301 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H3f3cP02301 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
H3f3cP02301 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
H3f3cP02301 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
H3f3cP02301 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H3f3cP02301 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.18■□□□□ 0.18
H3f3cP02301 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.18■□□□□ 0.18
H3f3cP02301 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
H3f3cP02301 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H3f3cP02301 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H3f3cP02301 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H3f3cP02301 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H3f3cP02301 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H3f3cP02301 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.17■□□□□ 0.18
H3f3cP02301 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.17■□□□□ 0.18
H3f3cP02301 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.17■□□□□ 0.18
H3f3cP02301 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H3f3cP02301 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC16.17■□□□□ 0.18
H3f3cP02301 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC16.17■□□□□ 0.18
H3f3cP02301 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.17■□□□□ 0.18
H3f3cP02301 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H3f3cP02301 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H3f3cP02301 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
H3f3cP02301 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
H3f3cP02301 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H3f3cP02301 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H3f3cP02301 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
H3f3cP02301 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
H3f3cP02301 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
H3f3cP02301 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
H3f3cP02301 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
H3f3cP02301 Gm18284-201ENSMUST00000172604 624 ntBASIC16.16■□□□□ 0.18
H3f3cP02301 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.16■□□□□ 0.18
H3f3cP02301 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
H3f3cP02301 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
H3f3cP02301 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
H3f3cP02301 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
H3f3cP02301 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms