Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hdac3O88895 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hdac3O88895 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Hdac3O88895 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hdac3O88895 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hdac3O88895 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Hdac3O88895 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hdac3O88895 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Hdac3O88895 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hdac3O88895 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC16.87■□□□□ 0.29
Hdac3O88895 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hdac3O88895 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hdac3O88895 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hdac3O88895 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hdac3O88895 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hdac3O88895 Gm8493-201ENSMUST00000196881 489 ntBASIC16.87■□□□□ 0.29
Hdac3O88895 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Hdac3O88895 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hdac3O88895 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hdac3O88895 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hdac3O88895 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Hdac3O88895 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hdac3O88895 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hdac3O88895 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hdac3O88895 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Hdac3O88895 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hdac3O88895 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hdac3O88895 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hdac3O88895 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hdac3O88895 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hdac3O88895 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hdac3O88895 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hdac3O88895 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Hdac3O88895 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC16.86■□□□□ 0.29
Hdac3O88895 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hdac3O88895 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hdac3O88895 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Hdac3O88895 Flvcr1-202ENSMUST00000191946 1216 ntBASIC16.86■□□□□ 0.29
Hdac3O88895 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hdac3O88895 Serp2-204ENSMUST00000228055 705 ntBASIC16.86■□□□□ 0.29
Hdac3O88895 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hdac3O88895 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC16.86■□□□□ 0.29
Hdac3O88895 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hdac3O88895 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.86■□□□□ 0.29
Hdac3O88895 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.86■□□□□ 0.29
Hdac3O88895 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hdac3O88895 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hdac3O88895 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Hdac3O88895 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Hdac3O88895 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Hdac3O88895 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hdac3O88895 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hdac3O88895 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Hdac3O88895 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC16.85■□□□□ 0.29
Hdac3O88895 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hdac3O88895 Gm6139-201ENSMUST00000079261 882 ntBASIC16.85■□□□□ 0.29
Hdac3O88895 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hdac3O88895 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hdac3O88895 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hdac3O88895 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Hdac3O88895 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Hdac3O88895 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.85■□□□□ 0.29
Hdac3O88895 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hdac3O88895 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC16.85■□□□□ 0.29
Hdac3O88895 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Hdac3O88895 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hdac3O88895 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hdac3O88895 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.84■□□□□ 0.29
Hdac3O88895 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Hdac3O88895 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hdac3O88895 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hdac3O88895 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hdac3O88895 Gm12251-201ENSMUST00000117893 792 ntBASIC16.84■□□□□ 0.29
Hdac3O88895 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC16.84■□□□□ 0.29
Hdac3O88895 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Hdac3O88895 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hdac3O88895 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hdac3O88895 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Hdac3O88895 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Hdac3O88895 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Hdac3O88895 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.83■□□□□ 0.29
Hdac3O88895 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Hdac3O88895 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
Hdac3O88895 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Hdac3O88895 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hdac3O88895 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Hdac3O88895 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hdac3O88895 Smad6-203ENSMUST00000179458 273 ntBASIC16.83■□□□□ 0.28
Hdac3O88895 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Hdac3O88895 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hdac3O88895 Gm43173-201ENSMUST00000202246 593 ntBASIC16.83■□□□□ 0.28
Hdac3O88895 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hdac3O88895 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hdac3O88895 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hdac3O88895 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hdac3O88895 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hdac3O88895 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hdac3O88895 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hdac3O88895 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hdac3O88895 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms