Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hcn1O88704 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Hcn1O88704 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hcn1O88704 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hcn1O88704 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.08■□□□□ 0.48
Hcn1O88704 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hcn1O88704 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Hcn1O88704 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hcn1O88704 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hcn1O88704 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hcn1O88704 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Hcn1O88704 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Hcn1O88704 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Hcn1O88704 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Hcn1O88704 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hcn1O88704 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hcn1O88704 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hcn1O88704 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Hcn1O88704 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Hcn1O88704 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.07■□□□□ 0.48
Hcn1O88704 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hcn1O88704 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hcn1O88704 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hcn1O88704 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
Hcn1O88704 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hcn1O88704 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hcn1O88704 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hcn1O88704 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hcn1O88704 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
Hcn1O88704 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Hcn1O88704 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.06■□□□□ 0.48
Hcn1O88704 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hcn1O88704 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hcn1O88704 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Hcn1O88704 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Hcn1O88704 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hcn1O88704 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Hcn1O88704 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.06■□□□□ 0.48
Hcn1O88704 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hcn1O88704 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hcn1O88704 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.05■□□□□ 0.48
Hcn1O88704 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hcn1O88704 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hcn1O88704 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Hcn1O88704 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Hcn1O88704 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Hcn1O88704 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hcn1O88704 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hcn1O88704 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Hcn1O88704 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.05■□□□□ 0.48
Hcn1O88704 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Hcn1O88704 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hcn1O88704 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hcn1O88704 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hcn1O88704 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hcn1O88704 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Hcn1O88704 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hcn1O88704 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.05■□□□□ 0.48
Hcn1O88704 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.04■□□□□ 0.48
Hcn1O88704 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hcn1O88704 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hcn1O88704 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hcn1O88704 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.04■□□□□ 0.48
Hcn1O88704 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hcn1O88704 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.04■□□□□ 0.48
Hcn1O88704 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Hcn1O88704 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hcn1O88704 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hcn1O88704 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hcn1O88704 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Hcn1O88704 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Hcn1O88704 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hcn1O88704 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hcn1O88704 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Hcn1O88704 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Hcn1O88704 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.03■□□□□ 0.48
Hcn1O88704 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.03■□□□□ 0.48
Hcn1O88704 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.03■□□□□ 0.48
Hcn1O88704 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hcn1O88704 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hcn1O88704 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hcn1O88704 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hcn1O88704 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Hcn1O88704 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hcn1O88704 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hcn1O88704 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hcn1O88704 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Hcn1O88704 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hcn1O88704 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hcn1O88704 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Hcn1O88704 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.02■□□□□ 0.48
Hcn1O88704 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hcn1O88704 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Hcn1O88704 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hcn1O88704 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hcn1O88704 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Hcn1O88704 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hcn1O88704 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Hcn1O88704 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Hcn1O88704 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.02■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms