Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.02■□□□□ 0.96
Trdmt1O55055 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC21.02■□□□□ 0.96
Trdmt1O55055 Mir6982-201ENSMUST00000184354 68 ntBASIC21.02■□□□□ 0.96
Trdmt1O55055 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trdmt1O55055 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC21.02■□□□□ 0.95
Trdmt1O55055 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trdmt1O55055 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trdmt1O55055 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trdmt1O55055 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC21.01■□□□□ 0.95
Trdmt1O55055 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trdmt1O55055 Gm44549-201ENSMUST00000208351 577 ntBASIC21.01■□□□□ 0.95
Trdmt1O55055 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Trdmt1O55055 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trdmt1O55055 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trdmt1O55055 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trdmt1O55055 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trdmt1O55055 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trdmt1O55055 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Trdmt1O55055 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC21■□□□□ 0.95
Trdmt1O55055 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Trdmt1O55055 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trdmt1O55055 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC21■□□□□ 0.95
Trdmt1O55055 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trdmt1O55055 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.99■□□□□ 0.95
Trdmt1O55055 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Trdmt1O55055 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.99■□□□□ 0.95
Trdmt1O55055 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Trdmt1O55055 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.99■□□□□ 0.95
Trdmt1O55055 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trdmt1O55055 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trdmt1O55055 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trdmt1O55055 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Trdmt1O55055 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trdmt1O55055 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Trdmt1O55055 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trdmt1O55055 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trdmt1O55055 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trdmt1O55055 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trdmt1O55055 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trdmt1O55055 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Trdmt1O55055 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.97■□□□□ 0.95
Trdmt1O55055 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC20.97■□□□□ 0.95
Trdmt1O55055 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.97■□□□□ 0.95
Trdmt1O55055 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trdmt1O55055 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.97■□□□□ 0.95
Trdmt1O55055 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trdmt1O55055 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trdmt1O55055 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trdmt1O55055 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trdmt1O55055 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trdmt1O55055 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trdmt1O55055 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trdmt1O55055 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trdmt1O55055 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.96■□□□□ 0.95
Trdmt1O55055 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.96■□□□□ 0.95
Trdmt1O55055 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.96■□□□□ 0.95
Trdmt1O55055 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trdmt1O55055 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trdmt1O55055 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trdmt1O55055 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trdmt1O55055 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trdmt1O55055 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
Trdmt1O55055 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trdmt1O55055 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Trdmt1O55055 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.95■□□□□ 0.94
Trdmt1O55055 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trdmt1O55055 Gm11249-201ENSMUST00000117071 859 ntBASIC20.95■□□□□ 0.94
Trdmt1O55055 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
Trdmt1O55055 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
Trdmt1O55055 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trdmt1O55055 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trdmt1O55055 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Trdmt1O55055 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trdmt1O55055 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trdmt1O55055 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trdmt1O55055 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Trdmt1O55055 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trdmt1O55055 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trdmt1O55055 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trdmt1O55055 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trdmt1O55055 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trdmt1O55055 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Trdmt1O55055 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trdmt1O55055 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trdmt1O55055 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.93■□□□□ 0.94
Trdmt1O55055 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.93■□□□□ 0.94
Trdmt1O55055 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trdmt1O55055 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trdmt1O55055 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trdmt1O55055 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trdmt1O55055 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trdmt1O55055 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.93■□□□□ 0.94
Trdmt1O55055 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trdmt1O55055 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trdmt1O55055 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Trdmt1O55055 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trdmt1O55055 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trdmt1O55055 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trdmt1O55055 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trdmt1O55055 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms