Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.74■□□□□ 0.75
Cldn5O54942 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cldn5O54942 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cldn5O54942 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Cldn5O54942 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cldn5O54942 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cldn5O54942 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cldn5O54942 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cldn5O54942 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
Cldn5O54942 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cldn5O54942 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.73■□□□□ 0.75
Cldn5O54942 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.73■□□□□ 0.75
Cldn5O54942 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cldn5O54942 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cldn5O54942 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cldn5O54942 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cldn5O54942 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cldn5O54942 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Cldn5O54942 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cldn5O54942 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cldn5O54942 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cldn5O54942 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cldn5O54942 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.72■□□□□ 0.75
Cldn5O54942 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cldn5O54942 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cldn5O54942 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.72■□□□□ 0.75
Cldn5O54942 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.72■□□□□ 0.75
Cldn5O54942 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cldn5O54942 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cldn5O54942 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cldn5O54942 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cldn5O54942 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cldn5O54942 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cldn5O54942 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cldn5O54942 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cldn5O54942 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Cldn5O54942 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Cldn5O54942 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cldn5O54942 Mir5133-201ENSMUST00000174955 77 ntBASIC19.71■□□□□ 0.75
Cldn5O54942 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.71■□□□□ 0.75
Cldn5O54942 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cldn5O54942 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cldn5O54942 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cldn5O54942 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cldn5O54942 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cldn5O54942 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cldn5O54942 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cldn5O54942 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cldn5O54942 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cldn5O54942 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cldn5O54942 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Cldn5O54942 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cldn5O54942 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Cldn5O54942 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cldn5O54942 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Cldn5O54942 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cldn5O54942 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cldn5O54942 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cldn5O54942 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cldn5O54942 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cldn5O54942 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cldn5O54942 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.69■□□□□ 0.74
Cldn5O54942 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cldn5O54942 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cldn5O54942 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.69■□□□□ 0.74
Cldn5O54942 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cldn5O54942 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cldn5O54942 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cldn5O54942 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cldn5O54942 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cldn5O54942 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cldn5O54942 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cldn5O54942 Gm13148-201ENSMUST00000118892 745 ntBASIC19.68■□□□□ 0.74
Cldn5O54942 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.68■□□□□ 0.74
Cldn5O54942 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.68■□□□□ 0.74
Cldn5O54942 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cldn5O54942 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cldn5O54942 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cldn5O54942 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cldn5O54942 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cldn5O54942 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cldn5O54942 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cldn5O54942 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.67■□□□□ 0.74
Cldn5O54942 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cldn5O54942 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cldn5O54942 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cldn5O54942 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cldn5O54942 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cldn5O54942 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cldn5O54942 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cldn5O54942 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cldn5O54942 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cldn5O54942 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.66■□□□□ 0.74
Cldn5O54942 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cldn5O54942 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cldn5O54942 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.66■□□□□ 0.74
Cldn5O54942 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.66■□□□□ 0.74
Cldn5O54942 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cldn5O54942 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Cldn5O54942 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms