Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.8■□□□□ 0.92
Sptlc1O35704 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Sptlc1O35704 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.8■□□□□ 0.92
Sptlc1O35704 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sptlc1O35704 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sptlc1O35704 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sptlc1O35704 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Sptlc1O35704 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sptlc1O35704 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.79■□□□□ 0.92
Sptlc1O35704 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.79■□□□□ 0.92
Sptlc1O35704 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.78■□□□□ 0.92
Sptlc1O35704 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Sptlc1O35704 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Sptlc1O35704 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sptlc1O35704 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Sptlc1O35704 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Sptlc1O35704 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Sptlc1O35704 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sptlc1O35704 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.78■□□□□ 0.92
Sptlc1O35704 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sptlc1O35704 Gm13168-201ENSMUST00000121771 632 ntBASIC20.78■□□□□ 0.92
Sptlc1O35704 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Sptlc1O35704 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Sptlc1O35704 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.78■□□□□ 0.92
Sptlc1O35704 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sptlc1O35704 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.77■□□□□ 0.92
Sptlc1O35704 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.77■□□□□ 0.92
Sptlc1O35704 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Sptlc1O35704 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sptlc1O35704 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sptlc1O35704 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.77■□□□□ 0.92
Sptlc1O35704 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Sptlc1O35704 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Sptlc1O35704 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Sptlc1O35704 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sptlc1O35704 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Sptlc1O35704 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sptlc1O35704 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sptlc1O35704 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.76■□□□□ 0.91
Sptlc1O35704 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sptlc1O35704 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sptlc1O35704 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Sptlc1O35704 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sptlc1O35704 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Sptlc1O35704 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.75■□□□□ 0.91
Sptlc1O35704 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Sptlc1O35704 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sptlc1O35704 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sptlc1O35704 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sptlc1O35704 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Sptlc1O35704 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Sptlc1O35704 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sptlc1O35704 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.75■□□□□ 0.91
Sptlc1O35704 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sptlc1O35704 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Sptlc1O35704 Trmt13-210ENSMUST00000198454 880 ntBASIC20.74■□□□□ 0.91
Sptlc1O35704 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sptlc1O35704 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sptlc1O35704 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Sptlc1O35704 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Sptlc1O35704 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sptlc1O35704 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sptlc1O35704 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sptlc1O35704 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sptlc1O35704 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Sptlc1O35704 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sptlc1O35704 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Sptlc1O35704 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Sptlc1O35704 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sptlc1O35704 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.73■□□□□ 0.91
Sptlc1O35704 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Sptlc1O35704 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sptlc1O35704 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.73■□□□□ 0.91
Sptlc1O35704 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sptlc1O35704 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sptlc1O35704 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Sptlc1O35704 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Sptlc1O35704 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Sptlc1O35704 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Sptlc1O35704 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Sptlc1O35704 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sptlc1O35704 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Sptlc1O35704 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.73■□□□□ 0.91
Sptlc1O35704 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
Sptlc1O35704 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Sptlc1O35704 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sptlc1O35704 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Sptlc1O35704 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Sptlc1O35704 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Sptlc1O35704 Gm10252-201ENSMUST00000209541 832 ntBASIC20.72■□□□□ 0.91
Sptlc1O35704 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Sptlc1O35704 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sptlc1O35704 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Sptlc1O35704 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sptlc1O35704 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sptlc1O35704 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sptlc1O35704 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.71■□□□□ 0.91
Sptlc1O35704 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sptlc1O35704 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.71■□□□□ 0.91
Sptlc1O35704 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms