Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Abca4O35600 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Abca4O35600 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Abca4O35600 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Abca4O35600 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Abca4O35600 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Abca4O35600 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Abca4O35600 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Abca4O35600 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Abca4O35600 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Abca4O35600 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Abca4O35600 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Abca4O35600 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Abca4O35600 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Abca4O35600 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Abca4O35600 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Abca4O35600 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC17.97■□□□□ 0.47
Abca4O35600 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Abca4O35600 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.97■□□□□ 0.47
Abca4O35600 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Abca4O35600 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Abca4O35600 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Abca4O35600 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Abca4O35600 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Abca4O35600 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.97■□□□□ 0.47
Abca4O35600 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.97■□□□□ 0.47
Abca4O35600 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Abca4O35600 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Abca4O35600 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Abca4O35600 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.96■□□□□ 0.47
Abca4O35600 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.96■□□□□ 0.47
Abca4O35600 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Abca4O35600 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.96■□□□□ 0.47
Abca4O35600 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.96■□□□□ 0.47
Abca4O35600 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC17.96■□□□□ 0.47
Abca4O35600 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Abca4O35600 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Abca4O35600 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Abca4O35600 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Abca4O35600 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
Abca4O35600 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Abca4O35600 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Abca4O35600 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Abca4O35600 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Abca4O35600 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Abca4O35600 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.95■□□□□ 0.46
Abca4O35600 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Abca4O35600 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.95■□□□□ 0.46
Abca4O35600 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Abca4O35600 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Abca4O35600 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Abca4O35600 Gm12382-201ENSMUST00000122005 922 ntBASIC17.95■□□□□ 0.46
Abca4O35600 Gm18959-201ENSMUST00000208954 655 ntBASIC17.95■□□□□ 0.46
Abca4O35600 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Abca4O35600 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Abca4O35600 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.94■□□□□ 0.46
Abca4O35600 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Abca4O35600 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Abca4O35600 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
Abca4O35600 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Abca4O35600 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Abca4O35600 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Abca4O35600 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Abca4O35600 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Abca4O35600 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Abca4O35600 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Abca4O35600 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Abca4O35600 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Abca4O35600 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Abca4O35600 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Abca4O35600 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Abca4O35600 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Abca4O35600 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.93■□□□□ 0.46
Abca4O35600 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Abca4O35600 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Abca4O35600 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Abca4O35600 Gm18025-201ENSMUST00000221733 862 ntBASIC17.93■□□□□ 0.46
Abca4O35600 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Abca4O35600 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Abca4O35600 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Abca4O35600 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Abca4O35600 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Abca4O35600 Gm45058-201ENSMUST00000205810 766 ntBASIC17.93■□□□□ 0.46
Abca4O35600 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.93■□□□□ 0.46
Abca4O35600 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC17.93■□□□□ 0.46
Abca4O35600 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Abca4O35600 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Abca4O35600 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Abca4O35600 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Abca4O35600 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Abca4O35600 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Abca4O35600 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Abca4O35600 Gm3375-201ENSMUST00000203929 796 ntBASIC17.92■□□□□ 0.46
Abca4O35600 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Abca4O35600 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Abca4O35600 Gm7153-201ENSMUST00000117092 455 ntBASIC17.91■□□□□ 0.46
Abca4O35600 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Abca4O35600 Gm43183-201ENSMUST00000200632 547 ntBASIC17.91■□□□□ 0.46
Abca4O35600 Gm6443-201ENSMUST00000203599 874 ntBASIC17.91■□□□□ 0.46
Abca4O35600 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms