Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Alx4O35137 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Alx4O35137 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Alx4O35137 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Alx4O35137 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Alx4O35137 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Alx4O35137 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Alx4O35137 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Alx4O35137 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.9■□□□□ 0.3
Alx4O35137 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Alx4O35137 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.9■□□□□ 0.3
Alx4O35137 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Alx4O35137 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Alx4O35137 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Alx4O35137 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Alx4O35137 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Alx4O35137 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Alx4O35137 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.89■□□□□ 0.29
Alx4O35137 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Alx4O35137 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.89■□□□□ 0.29
Alx4O35137 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Alx4O35137 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Alx4O35137 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Alx4O35137 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Alx4O35137 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.88■□□□□ 0.29
Alx4O35137 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.88■□□□□ 0.29
Alx4O35137 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Alx4O35137 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Alx4O35137 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Alx4O35137 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Alx4O35137 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Alx4O35137 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Alx4O35137 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Alx4O35137 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Alx4O35137 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Alx4O35137 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Alx4O35137 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.87■□□□□ 0.29
Alx4O35137 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Alx4O35137 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Alx4O35137 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Alx4O35137 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Alx4O35137 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Alx4O35137 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Alx4O35137 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Alx4O35137 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC16.87■□□□□ 0.29
Alx4O35137 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.87■□□□□ 0.29
Alx4O35137 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Alx4O35137 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.87■□□□□ 0.29
Alx4O35137 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Alx4O35137 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Alx4O35137 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC16.86■□□□□ 0.29
Alx4O35137 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Alx4O35137 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Alx4O35137 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Alx4O35137 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC16.86■□□□□ 0.29
Alx4O35137 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC16.86■□□□□ 0.29
Alx4O35137 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Alx4O35137 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Alx4O35137 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Alx4O35137 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Alx4O35137 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Alx4O35137 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Alx4O35137 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.86■□□□□ 0.29
Alx4O35137 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Alx4O35137 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Alx4O35137 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Alx4O35137 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Alx4O35137 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Alx4O35137 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Alx4O35137 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Alx4O35137 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.85■□□□□ 0.29
Alx4O35137 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Alx4O35137 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
Alx4O35137 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Alx4O35137 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Alx4O35137 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Alx4O35137 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Alx4O35137 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Alx4O35137 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Alx4O35137 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Alx4O35137 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.85■□□□□ 0.29
Alx4O35137 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Alx4O35137 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC16.85■□□□□ 0.29
Alx4O35137 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Alx4O35137 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Alx4O35137 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Alx4O35137 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Alx4O35137 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Alx4O35137 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Alx4O35137 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Alx4O35137 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Alx4O35137 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Alx4O35137 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Alx4O35137 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Alx4O35137 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.84■□□□□ 0.29
Alx4O35137 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Alx4O35137 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC16.84■□□□□ 0.29
Alx4O35137 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC16.84■□□□□ 0.29
Alx4O35137 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Alx4O35137 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms