Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ebf3O08791 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ebf3O08791 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.66■□□□□ 0.74
Ebf3O08791 Gm5075-201ENSMUST00000196916 622 ntBASIC19.66■□□□□ 0.74
Ebf3O08791 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.66■□□□□ 0.74
Ebf3O08791 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.66■□□□□ 0.74
Ebf3O08791 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ebf3O08791 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ebf3O08791 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Ebf3O08791 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ebf3O08791 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.66■□□□□ 0.74
Ebf3O08791 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ebf3O08791 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ebf3O08791 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ebf3O08791 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.65■□□□□ 0.74
Ebf3O08791 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Ebf3O08791 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.65■□□□□ 0.74
Ebf3O08791 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ebf3O08791 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.65■□□□□ 0.74
Ebf3O08791 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.65■□□□□ 0.74
Ebf3O08791 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.65■□□□□ 0.74
Ebf3O08791 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.65■□□□□ 0.74
Ebf3O08791 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ebf3O08791 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ebf3O08791 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.65■□□□□ 0.74
Ebf3O08791 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ebf3O08791 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.65■□□□□ 0.74
Ebf3O08791 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ebf3O08791 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.65■□□□□ 0.74
Ebf3O08791 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ebf3O08791 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ebf3O08791 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ebf3O08791 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ebf3O08791 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ebf3O08791 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.64■□□□□ 0.73
Ebf3O08791 Gm12527-201ENSMUST00000117967 564 ntBASIC19.64■□□□□ 0.73
Ebf3O08791 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Ebf3O08791 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.64■□□□□ 0.73
Ebf3O08791 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.64■□□□□ 0.73
Ebf3O08791 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ebf3O08791 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ebf3O08791 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ebf3O08791 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ebf3O08791 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ebf3O08791 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
Ebf3O08791 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ebf3O08791 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ebf3O08791 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.63■□□□□ 0.73
Ebf3O08791 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ebf3O08791 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ebf3O08791 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Ebf3O08791 Gm13534-201ENSMUST00000121169 513 ntBASIC19.63■□□□□ 0.73
Ebf3O08791 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.63■□□□□ 0.73
Ebf3O08791 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.63■□□□□ 0.73
Ebf3O08791 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ebf3O08791 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.63■□□□□ 0.73
Ebf3O08791 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ebf3O08791 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ebf3O08791 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ebf3O08791 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ebf3O08791 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ebf3O08791 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ebf3O08791 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ebf3O08791 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
Ebf3O08791 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Ebf3O08791 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ebf3O08791 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ebf3O08791 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ebf3O08791 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.62■□□□□ 0.73
Ebf3O08791 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ebf3O08791 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Ebf3O08791 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Ebf3O08791 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.62■□□□□ 0.73
Ebf3O08791 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ebf3O08791 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ebf3O08791 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ebf3O08791 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.62■□□□□ 0.73
Ebf3O08791 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ebf3O08791 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ebf3O08791 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.61■□□□□ 0.73
Ebf3O08791 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ebf3O08791 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ebf3O08791 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.61■□□□□ 0.73
Ebf3O08791 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ebf3O08791 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ebf3O08791 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ebf3O08791 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Ebf3O08791 Gm20760-201ENSMUST00000179197 648 ntBASIC19.61■□□□□ 0.73
Ebf3O08791 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ebf3O08791 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Ebf3O08791 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ebf3O08791 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.61■□□□□ 0.73
Ebf3O08791 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Ebf3O08791 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
Ebf3O08791 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Ebf3O08791 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
Ebf3O08791 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.6■□□□□ 0.73
Ebf3O08791 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ebf3O08791 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ebf3O08791 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms