Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 H2-K2-201ENSMUST00000174250 1049 ntBASIC21.38■■□□□ 1.01
B020004C17RikJ3QP07 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC21.38■■□□□ 1.01
B020004C17RikJ3QP07 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
B020004C17RikJ3QP07 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
B020004C17RikJ3QP07 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
B020004C17RikJ3QP07 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
B020004C17RikJ3QP07 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
B020004C17RikJ3QP07 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
B020004C17RikJ3QP07 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
B020004C17RikJ3QP07 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
B020004C17RikJ3QP07 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
B020004C17RikJ3QP07 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
B020004C17RikJ3QP07 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
B020004C17RikJ3QP07 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
B020004C17RikJ3QP07 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
B020004C17RikJ3QP07 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
B020004C17RikJ3QP07 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
B020004C17RikJ3QP07 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC21.37■■□□□ 1.01
B020004C17RikJ3QP07 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
B020004C17RikJ3QP07 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
B020004C17RikJ3QP07 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
B020004C17RikJ3QP07 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
B020004C17RikJ3QP07 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
B020004C17RikJ3QP07 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
B020004C17RikJ3QP07 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.36■■□□□ 1.01
B020004C17RikJ3QP07 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
B020004C17RikJ3QP07 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
B020004C17RikJ3QP07 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
B020004C17RikJ3QP07 Mir1199-201ENSMUST00000117015 119 ntBASIC21.36■■□□□ 1.01
B020004C17RikJ3QP07 Gm15847-201ENSMUST00000121417 1065 ntBASIC21.36■■□□□ 1.01
B020004C17RikJ3QP07 Gm13158-201ENSMUST00000122007 736 ntBASIC21.36■■□□□ 1.01
B020004C17RikJ3QP07 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
B020004C17RikJ3QP07 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
B020004C17RikJ3QP07 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
B020004C17RikJ3QP07 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
B020004C17RikJ3QP07 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
B020004C17RikJ3QP07 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
B020004C17RikJ3QP07 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
B020004C17RikJ3QP07 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
B020004C17RikJ3QP07 Krtap5-1-202ENSMUST00000188274 742 ntBASIC21.35■■□□□ 1.01
B020004C17RikJ3QP07 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
B020004C17RikJ3QP07 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
B020004C17RikJ3QP07 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
B020004C17RikJ3QP07 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
B020004C17RikJ3QP07 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
B020004C17RikJ3QP07 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
B020004C17RikJ3QP07 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.34■■□□□ 1.01
B020004C17RikJ3QP07 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
B020004C17RikJ3QP07 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.34■■□□□ 1.01
B020004C17RikJ3QP07 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
B020004C17RikJ3QP07 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
B020004C17RikJ3QP07 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC21.34■■□□□ 1.01
B020004C17RikJ3QP07 AC160393.1-201ENSMUST00000218378 1279 ntBASIC21.34■■□□□ 1.01
B020004C17RikJ3QP07 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
B020004C17RikJ3QP07 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
B020004C17RikJ3QP07 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
B020004C17RikJ3QP07 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1.01
B020004C17RikJ3QP07 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC21.33■■□□□ 1.01
B020004C17RikJ3QP07 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC21.33■■□□□ 1.01
B020004C17RikJ3QP07 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
B020004C17RikJ3QP07 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
B020004C17RikJ3QP07 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
B020004C17RikJ3QP07 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
B020004C17RikJ3QP07 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
B020004C17RikJ3QP07 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
B020004C17RikJ3QP07 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
B020004C17RikJ3QP07 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC21.32■■□□□ 1
B020004C17RikJ3QP07 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC21.32■■□□□ 1
B020004C17RikJ3QP07 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC21.32■■□□□ 1
B020004C17RikJ3QP07 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC21.32■■□□□ 1
B020004C17RikJ3QP07 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
B020004C17RikJ3QP07 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
B020004C17RikJ3QP07 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
B020004C17RikJ3QP07 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
B020004C17RikJ3QP07 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
B020004C17RikJ3QP07 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC21.32■■□□□ 1
B020004C17RikJ3QP07 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.32■■□□□ 1
B020004C17RikJ3QP07 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
B020004C17RikJ3QP07 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
B020004C17RikJ3QP07 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC21.32■■□□□ 1
B020004C17RikJ3QP07 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC21.31■■□□□ 1
B020004C17RikJ3QP07 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.31■■□□□ 1
B020004C17RikJ3QP07 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC21.31■■□□□ 1
B020004C17RikJ3QP07 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.31■■□□□ 1
B020004C17RikJ3QP07 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
B020004C17RikJ3QP07 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC21.31■■□□□ 1
B020004C17RikJ3QP07 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC21.31■■□□□ 1
B020004C17RikJ3QP07 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
B020004C17RikJ3QP07 AC163280.1-201ENSMUST00000228194 1100 ntBASIC21.31■■□□□ 1
B020004C17RikJ3QP07 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.31■■□□□ 1
B020004C17RikJ3QP07 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
B020004C17RikJ3QP07 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
B020004C17RikJ3QP07 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
B020004C17RikJ3QP07 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
B020004C17RikJ3QP07 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
B020004C17RikJ3QP07 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
B020004C17RikJ3QP07 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC21.3■■□□□ 1
B020004C17RikJ3QP07 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC21.3■■□□□ 1
B020004C17RikJ3QP07 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC21.3■■□□□ 1
B020004C17RikJ3QP07 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC21.3■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms