Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC34.9■■■■□ 3.18
Ccdc180J3QNE4 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
Ccdc180J3QNE4 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC34.9■■■■□ 3.18
Ccdc180J3QNE4 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
Ccdc180J3QNE4 Mir6982-201ENSMUST00000184354 68 ntBASIC34.89■■■■□ 3.18
Ccdc180J3QNE4 AC163280.1-201ENSMUST00000228194 1100 ntBASIC34.89■■■■□ 3.18
Ccdc180J3QNE4 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC34.89■■■■□ 3.18
Ccdc180J3QNE4 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC34.89■■■■□ 3.18
Ccdc180J3QNE4 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC34.88■■■■□ 3.17
Ccdc180J3QNE4 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC34.88■■■■□ 3.17
Ccdc180J3QNE4 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC34.88■■■■□ 3.17
Ccdc180J3QNE4 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC34.88■■■■□ 3.17
Ccdc180J3QNE4 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
Ccdc180J3QNE4 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC34.88■■■■□ 3.17
Ccdc180J3QNE4 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
Ccdc180J3QNE4 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC34.88■■■■□ 3.17
Ccdc180J3QNE4 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC34.88■■■■□ 3.17
Ccdc180J3QNE4 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC34.88■■■■□ 3.17
Ccdc180J3QNE4 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
Ccdc180J3QNE4 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC34.88■■■■□ 3.17
Ccdc180J3QNE4 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC34.88■■■■□ 3.17
Ccdc180J3QNE4 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
Ccdc180J3QNE4 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
Ccdc180J3QNE4 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC34.87■■■■□ 3.17
Ccdc180J3QNE4 AC153881.1-201ENSMUST00000214448 284 ntBASIC34.87■■■■□ 3.17
Ccdc180J3QNE4 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC34.87■■■■□ 3.17
Ccdc180J3QNE4 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
Ccdc180J3QNE4 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC34.87■■■■□ 3.17
Ccdc180J3QNE4 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC34.86■■■■□ 3.17
Ccdc180J3QNE4 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC34.86■■■■□ 3.17
Ccdc180J3QNE4 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
Ccdc180J3QNE4 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
Ccdc180J3QNE4 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
Ccdc180J3QNE4 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
Ccdc180J3QNE4 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC34.85■■■■□ 3.17
Ccdc180J3QNE4 Gm18666-201ENSMUST00000190039 958 ntBASIC34.85■■■■□ 3.17
Ccdc180J3QNE4 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC34.85■■■■□ 3.17
Ccdc180J3QNE4 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC34.84■■■■□ 3.17
Ccdc180J3QNE4 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC34.84■■■■□ 3.17
Ccdc180J3QNE4 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC34.84■■■■□ 3.17
Ccdc180J3QNE4 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
Ccdc180J3QNE4 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
Ccdc180J3QNE4 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC34.83■■■■□ 3.17
Ccdc180J3QNE4 Wnt10b-205ENSMUST00000226846 1204 ntBASIC34.83■■■■□ 3.17
Ccdc180J3QNE4 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC34.83■■■■□ 3.17
Ccdc180J3QNE4 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC34.83■■■■□ 3.17
Ccdc180J3QNE4 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC34.83■■■■□ 3.17
Ccdc180J3QNE4 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC34.83■■■■□ 3.17
Ccdc180J3QNE4 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC34.82■■■■□ 3.17
Ccdc180J3QNE4 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.17
Ccdc180J3QNE4 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.17
Ccdc180J3QNE4 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.17
Ccdc180J3QNE4 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.17
Ccdc180J3QNE4 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC34.82■■■■□ 3.16
Ccdc180J3QNE4 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC34.82■■■■□ 3.16
Ccdc180J3QNE4 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
Ccdc180J3QNE4 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
Ccdc180J3QNE4 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
Ccdc180J3QNE4 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
Ccdc180J3QNE4 Gm6576-201ENSMUST00000169678 883 ntBASIC34.82■■■■□ 3.16
Ccdc180J3QNE4 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC34.82■■■■□ 3.16
Ccdc180J3QNE4 Gm29994-201ENSMUST00000195495 1193 ntBASIC34.82■■■■□ 3.16
Ccdc180J3QNE4 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
Ccdc180J3QNE4 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
Ccdc180J3QNE4 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
Ccdc180J3QNE4 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
Ccdc180J3QNE4 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC34.8■■■■□ 3.16
Ccdc180J3QNE4 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC34.8■■■■□ 3.16
Ccdc180J3QNE4 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC34.8■■■■□ 3.16
Ccdc180J3QNE4 AC158538.1-201ENSMUST00000225870 294 ntBASIC34.8■■■■□ 3.16
Ccdc180J3QNE4 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
Ccdc180J3QNE4 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
Ccdc180J3QNE4 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC34.8■■■■□ 3.16
Ccdc180J3QNE4 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC34.8■■■■□ 3.16
Ccdc180J3QNE4 Mir1199-201ENSMUST00000117015 119 ntBASIC34.79■■■■□ 3.16
Ccdc180J3QNE4 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
Ccdc180J3QNE4 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC34.79■■■■□ 3.16
Ccdc180J3QNE4 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC34.79■■■■□ 3.16
Ccdc180J3QNE4 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC34.79■■■■□ 3.16
Ccdc180J3QNE4 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC34.79■■■■□ 3.16
Ccdc180J3QNE4 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
Ccdc180J3QNE4 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
Ccdc180J3QNE4 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC34.78■■■■□ 3.16
Ccdc180J3QNE4 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC34.78■■■■□ 3.16
Ccdc180J3QNE4 Gm13836-201ENSMUST00000121159 501 ntBASIC34.78■■■■□ 3.16
Ccdc180J3QNE4 Gm13158-201ENSMUST00000122007 736 ntBASIC34.78■■■■□ 3.16
Ccdc180J3QNE4 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
Ccdc180J3QNE4 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
Ccdc180J3QNE4 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC34.78■■■■□ 3.16
Ccdc180J3QNE4 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC34.78■■■■□ 3.16
Ccdc180J3QNE4 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
Ccdc180J3QNE4 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC34.77■■■■□ 3.16
Ccdc180J3QNE4 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
Ccdc180J3QNE4 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
Ccdc180J3QNE4 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC34.77■■■■□ 3.16
Ccdc180J3QNE4 Gm15847-201ENSMUST00000121417 1065 ntBASIC34.77■■■■□ 3.16
Ccdc180J3QNE4 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC34.77■■■■□ 3.16
Ccdc180J3QNE4 Gm9484-201ENSMUST00000195892 1159 ntBASIC34.77■■■■□ 3.16
Ccdc180J3QNE4 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC34.77■■■■□ 3.16
Ccdc180J3QNE4 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms