Protein–RNA interactions for Protein: J3QMK1

Sgo2b, Shugoshin 2B, mousemouse

Predictions only

Length 1,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgo2bJ3QMK1 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sgo2bJ3QMK1 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.9■□□□□ 0.62
Sgo2bJ3QMK1 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Sgo2bJ3QMK1 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sgo2bJ3QMK1 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
Sgo2bJ3QMK1 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Sgo2bJ3QMK1 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sgo2bJ3QMK1 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sgo2bJ3QMK1 BC021767-201ENSMUST00000126387 1716 ntBASIC18.89■□□□□ 0.61
Sgo2bJ3QMK1 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Sgo2bJ3QMK1 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sgo2bJ3QMK1 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sgo2bJ3QMK1 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Sgo2bJ3QMK1 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.89■□□□□ 0.61
Sgo2bJ3QMK1 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sgo2bJ3QMK1 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sgo2bJ3QMK1 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sgo2bJ3QMK1 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sgo2bJ3QMK1 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sgo2bJ3QMK1 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.89■□□□□ 0.61
Sgo2bJ3QMK1 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sgo2bJ3QMK1 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.88■□□□□ 0.61
Sgo2bJ3QMK1 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sgo2bJ3QMK1 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sgo2bJ3QMK1 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
Sgo2bJ3QMK1 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sgo2bJ3QMK1 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sgo2bJ3QMK1 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sgo2bJ3QMK1 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sgo2bJ3QMK1 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Sgo2bJ3QMK1 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sgo2bJ3QMK1 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sgo2bJ3QMK1 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Sgo2bJ3QMK1 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sgo2bJ3QMK1 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Sgo2bJ3QMK1 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sgo2bJ3QMK1 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sgo2bJ3QMK1 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sgo2bJ3QMK1 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sgo2bJ3QMK1 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.88■□□□□ 0.61
Sgo2bJ3QMK1 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sgo2bJ3QMK1 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sgo2bJ3QMK1 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sgo2bJ3QMK1 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sgo2bJ3QMK1 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sgo2bJ3QMK1 Gm7860-201ENSMUST00000121190 879 ntBASIC18.87■□□□□ 0.61
Sgo2bJ3QMK1 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sgo2bJ3QMK1 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Sgo2bJ3QMK1 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.87■□□□□ 0.61
Sgo2bJ3QMK1 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.87■□□□□ 0.61
Sgo2bJ3QMK1 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
Sgo2bJ3QMK1 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.87■□□□□ 0.61
Sgo2bJ3QMK1 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sgo2bJ3QMK1 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sgo2bJ3QMK1 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sgo2bJ3QMK1 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sgo2bJ3QMK1 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sgo2bJ3QMK1 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sgo2bJ3QMK1 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sgo2bJ3QMK1 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sgo2bJ3QMK1 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sgo2bJ3QMK1 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sgo2bJ3QMK1 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sgo2bJ3QMK1 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sgo2bJ3QMK1 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sgo2bJ3QMK1 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sgo2bJ3QMK1 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sgo2bJ3QMK1 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sgo2bJ3QMK1 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sgo2bJ3QMK1 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Sgo2bJ3QMK1 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.86■□□□□ 0.61
Sgo2bJ3QMK1 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sgo2bJ3QMK1 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Sgo2bJ3QMK1 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sgo2bJ3QMK1 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Sgo2bJ3QMK1 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sgo2bJ3QMK1 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sgo2bJ3QMK1 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Sgo2bJ3QMK1 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.86■□□□□ 0.61
Sgo2bJ3QMK1 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Sgo2bJ3QMK1 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sgo2bJ3QMK1 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Sgo2bJ3QMK1 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Sgo2bJ3QMK1 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sgo2bJ3QMK1 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sgo2bJ3QMK1 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Sgo2bJ3QMK1 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sgo2bJ3QMK1 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sgo2bJ3QMK1 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sgo2bJ3QMK1 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Sgo2bJ3QMK1 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.85■□□□□ 0.61
Sgo2bJ3QMK1 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.85■□□□□ 0.61
Sgo2bJ3QMK1 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sgo2bJ3QMK1 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Sgo2bJ3QMK1 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Sgo2bJ3QMK1 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.85■□□□□ 0.61
Sgo2bJ3QMK1 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Sgo2bJ3QMK1 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Sgo2bJ3QMK1 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sgo2bJ3QMK1 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms