Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Nespas-201ENSMUST00000143738 1083 ntBASIC18.93■□□□□ 0.62
Gm3139J3QK78 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Gm3139J3QK78 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Gm3139J3QK78 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Gm3139J3QK78 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
Gm3139J3QK78 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gm3139J3QK78 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gm3139J3QK78 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
Gm3139J3QK78 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gm3139J3QK78 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Gm3139J3QK78 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Gm3139J3QK78 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gm3139J3QK78 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gm3139J3QK78 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gm3139J3QK78 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Gm3139J3QK78 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Gm3139J3QK78 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.92■□□□□ 0.62
Gm3139J3QK78 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Gm3139J3QK78 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm3139J3QK78 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm3139J3QK78 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm3139J3QK78 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.92■□□□□ 0.62
Gm3139J3QK78 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.92■□□□□ 0.62
Gm3139J3QK78 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Gm3139J3QK78 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm3139J3QK78 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm3139J3QK78 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm3139J3QK78 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm3139J3QK78 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm3139J3QK78 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.92■□□□□ 0.62
Gm3139J3QK78 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm3139J3QK78 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm3139J3QK78 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.92■□□□□ 0.62
Gm3139J3QK78 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm3139J3QK78 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm3139J3QK78 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm3139J3QK78 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm3139J3QK78 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.91■□□□□ 0.62
Gm3139J3QK78 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.91■□□□□ 0.62
Gm3139J3QK78 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Gm3139J3QK78 Gm10602-201ENSMUST00000098239 609 ntBASIC18.91■□□□□ 0.62
Gm3139J3QK78 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm3139J3QK78 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Gm3139J3QK78 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
Gm3139J3QK78 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm3139J3QK78 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm3139J3QK78 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm3139J3QK78 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.9■□□□□ 0.62
Gm3139J3QK78 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm3139J3QK78 Golph3-202ENSMUST00000226517 2359 ntBASIC18.9■□□□□ 0.62
Gm3139J3QK78 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Gm3139J3QK78 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Gm3139J3QK78 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Gm3139J3QK78 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Gm3139J3QK78 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Gm3139J3QK78 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Gm3139J3QK78 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Gm3139J3QK78 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.89■□□□□ 0.61
Gm3139J3QK78 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.89■□□□□ 0.61
Gm3139J3QK78 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.89■□□□□ 0.61
Gm3139J3QK78 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm3139J3QK78 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Gm3139J3QK78 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm3139J3QK78 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm3139J3QK78 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm3139J3QK78 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm3139J3QK78 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Gm3139J3QK78 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm3139J3QK78 Gm7290-201ENSMUST00000104990 617 ntBASIC18.88■□□□□ 0.61
Gm3139J3QK78 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.88■□□□□ 0.61
Gm3139J3QK78 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Gm3139J3QK78 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm3139J3QK78 Gm12918-201ENSMUST00000120234 636 ntBASIC18.88■□□□□ 0.61
Gm3139J3QK78 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Gm3139J3QK78 Gm15710-201ENSMUST00000121821 636 ntBASIC18.88■□□□□ 0.61
Gm3139J3QK78 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Gm3139J3QK78 Gm29257-201ENSMUST00000186115 639 ntBASIC18.88■□□□□ 0.61
Gm3139J3QK78 Gm5075-201ENSMUST00000196916 622 ntBASIC18.88■□□□□ 0.61
Gm3139J3QK78 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm3139J3QK78 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm3139J3QK78 Gm6365-201ENSMUST00000054711 744 ntBASIC18.88■□□□□ 0.61
Gm3139J3QK78 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm3139J3QK78 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.88■□□□□ 0.61
Gm3139J3QK78 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.88■□□□□ 0.61
Gm3139J3QK78 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm3139J3QK78 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.88■□□□□ 0.61
Gm3139J3QK78 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Gm3139J3QK78 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Gm3139J3QK78 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.88■□□□□ 0.61
Gm3139J3QK78 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Gm3139J3QK78 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm3139J3QK78 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Gm3139J3QK78 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Gm3139J3QK78 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm3139J3QK78 Mir5133-201ENSMUST00000174955 77 ntBASIC18.87■□□□□ 0.61
Gm3139J3QK78 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm3139J3QK78 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm3139J3QK78 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm3139J3QK78 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm3139J3QK78 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms