Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh17E9PXF0 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh17E9PXF0 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.6■□□□□ 0.41
Pcdh17E9PXF0 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh17E9PXF0 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh17E9PXF0 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh17E9PXF0 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh17E9PXF0 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh17E9PXF0 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh17E9PXF0 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh17E9PXF0 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh17E9PXF0 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh17E9PXF0 Gm7290-201ENSMUST00000104990 617 ntBASIC17.59■□□□□ 0.41
Pcdh17E9PXF0 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.59■□□□□ 0.41
Pcdh17E9PXF0 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh17E9PXF0 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh17E9PXF0 Gm12918-201ENSMUST00000120234 636 ntBASIC17.59■□□□□ 0.41
Pcdh17E9PXF0 Gm15710-201ENSMUST00000121821 636 ntBASIC17.59■□□□□ 0.41
Pcdh17E9PXF0 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.59■□□□□ 0.41
Pcdh17E9PXF0 Gm5075-201ENSMUST00000196916 622 ntBASIC17.59■□□□□ 0.41
Pcdh17E9PXF0 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.59■□□□□ 0.41
Pcdh17E9PXF0 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.59■□□□□ 0.41
Pcdh17E9PXF0 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.59■□□□□ 0.41
Pcdh17E9PXF0 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh17E9PXF0 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.59■□□□□ 0.41
Pcdh17E9PXF0 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Pcdh17E9PXF0 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.58■□□□□ 0.41
Pcdh17E9PXF0 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.58■□□□□ 0.41
Pcdh17E9PXF0 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdh17E9PXF0 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Pcdh17E9PXF0 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdh17E9PXF0 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.58■□□□□ 0.4
Pcdh17E9PXF0 Nespas-201ENSMUST00000143738 1083 ntBASIC17.58■□□□□ 0.4
Pcdh17E9PXF0 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdh17E9PXF0 Gm6365-201ENSMUST00000054711 744 ntBASIC17.58■□□□□ 0.4
Pcdh17E9PXF0 Gm4968-201ENSMUST00000071458 858 ntBASIC17.58■□□□□ 0.4
Pcdh17E9PXF0 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
Pcdh17E9PXF0 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdh17E9PXF0 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdh17E9PXF0 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Pcdh17E9PXF0 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdh17E9PXF0 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Pcdh17E9PXF0 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Pcdh17E9PXF0 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh17E9PXF0 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh17E9PXF0 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh17E9PXF0 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.57■□□□□ 0.4
Pcdh17E9PXF0 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Pcdh17E9PXF0 Gm13148-201ENSMUST00000118892 745 ntBASIC17.57■□□□□ 0.4
Pcdh17E9PXF0 Gm7860-201ENSMUST00000121190 879 ntBASIC17.57■□□□□ 0.4
Pcdh17E9PXF0 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh17E9PXF0 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.57■□□□□ 0.4
Pcdh17E9PXF0 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.57■□□□□ 0.4
Pcdh17E9PXF0 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.57■□□□□ 0.4
Pcdh17E9PXF0 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh17E9PXF0 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh17E9PXF0 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh17E9PXF0 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh17E9PXF0 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.56■□□□□ 0.4
Pcdh17E9PXF0 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Pcdh17E9PXF0 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh17E9PXF0 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh17E9PXF0 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh17E9PXF0 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh17E9PXF0 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Pcdh17E9PXF0 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh17E9PXF0 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.55■□□□□ 0.4
Pcdh17E9PXF0 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh17E9PXF0 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh17E9PXF0 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh17E9PXF0 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.55■□□□□ 0.4
Pcdh17E9PXF0 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh17E9PXF0 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh17E9PXF0 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh17E9PXF0 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh17E9PXF0 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh17E9PXF0 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh17E9PXF0 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.54■□□□□ 0.4
Pcdh17E9PXF0 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh17E9PXF0 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh17E9PXF0 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.54■□□□□ 0.4
Pcdh17E9PXF0 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh17E9PXF0 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Pcdh17E9PXF0 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Pcdh17E9PXF0 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh17E9PXF0 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh17E9PXF0 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh17E9PXF0 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.54■□□□□ 0.4
Pcdh17E9PXF0 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh17E9PXF0 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh17E9PXF0 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh17E9PXF0 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh17E9PXF0 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh17E9PXF0 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Pcdh17E9PXF0 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.53■□□□□ 0.4
Pcdh17E9PXF0 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Pcdh17E9PXF0 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh17E9PXF0 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh17E9PXF0 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Pcdh17E9PXF0 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms