Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
Hfm1D3Z4R1 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Hfm1D3Z4R1 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Hfm1D3Z4R1 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Hfm1D3Z4R1 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Hfm1D3Z4R1 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
Hfm1D3Z4R1 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC27.02■■□□□ 1.92
Hfm1D3Z4R1 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Hfm1D3Z4R1 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC27.01■■□□□ 1.91
Hfm1D3Z4R1 AC175538.1-201ENSMUST00000225343 1269 ntBASIC27.01■■□□□ 1.91
Hfm1D3Z4R1 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Hfm1D3Z4R1 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC27.01■■□□□ 1.91
Hfm1D3Z4R1 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Hfm1D3Z4R1 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Hfm1D3Z4R1 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Hfm1D3Z4R1 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC27.01■■□□□ 1.91
Hfm1D3Z4R1 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Hfm1D3Z4R1 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC27■■□□□ 1.91
Hfm1D3Z4R1 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC27■■□□□ 1.91
Hfm1D3Z4R1 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC27■■□□□ 1.91
Hfm1D3Z4R1 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC27■■□□□ 1.91
Hfm1D3Z4R1 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Hfm1D3Z4R1 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Hfm1D3Z4R1 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC27■■□□□ 1.91
Hfm1D3Z4R1 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC26.99■■□□□ 1.91
Hfm1D3Z4R1 Gm10231-201ENSMUST00000181584 441 ntBASIC26.99■■□□□ 1.91
Hfm1D3Z4R1 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Hfm1D3Z4R1 Gm10175-202ENSMUST00000208752 441 ntBASIC26.99■■□□□ 1.91
Hfm1D3Z4R1 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC26.99■■□□□ 1.91
Hfm1D3Z4R1 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Hfm1D3Z4R1 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Hfm1D3Z4R1 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Hfm1D3Z4R1 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Hfm1D3Z4R1 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC26.99■■□□□ 1.91
Hfm1D3Z4R1 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC26.99■■□□□ 1.91
Hfm1D3Z4R1 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Hfm1D3Z4R1 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC26.98■■□□□ 1.91
Hfm1D3Z4R1 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Hfm1D3Z4R1 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Hfm1D3Z4R1 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC26.98■■□□□ 1.91
Hfm1D3Z4R1 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC26.98■■□□□ 1.91
Hfm1D3Z4R1 Gm19094-201ENSMUST00000209791 1246 ntBASIC26.98■■□□□ 1.91
Hfm1D3Z4R1 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Hfm1D3Z4R1 Gm20100-201ENSMUST00000209418 2272 ntBASIC26.97■■□□□ 1.91
Hfm1D3Z4R1 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
Hfm1D3Z4R1 Snhg20-203ENSMUST00000182811 2153 ntBASIC26.97■■□□□ 1.91
Hfm1D3Z4R1 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC26.97■■□□□ 1.91
Hfm1D3Z4R1 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Hfm1D3Z4R1 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Hfm1D3Z4R1 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Hfm1D3Z4R1 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC26.96■■□□□ 1.91
Hfm1D3Z4R1 Wnt10b-205ENSMUST00000226846 1204 ntBASIC26.96■■□□□ 1.91
Hfm1D3Z4R1 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC26.96■■□□□ 1.91
Hfm1D3Z4R1 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC26.95■■□□□ 1.91
Hfm1D3Z4R1 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Hfm1D3Z4R1 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
Hfm1D3Z4R1 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC26.95■■□□□ 1.9
Hfm1D3Z4R1 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
Hfm1D3Z4R1 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Hfm1D3Z4R1 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Hfm1D3Z4R1 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Hfm1D3Z4R1 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Hfm1D3Z4R1 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Hfm1D3Z4R1 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Hfm1D3Z4R1 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC26.95■■□□□ 1.9
Hfm1D3Z4R1 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Hfm1D3Z4R1 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
Hfm1D3Z4R1 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Hfm1D3Z4R1 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Hfm1D3Z4R1 Alkbh1-212ENSMUST00000185301 408 ntBASIC26.94■■□□□ 1.9
Hfm1D3Z4R1 Gm43799-201ENSMUST00000201845 579 ntBASIC26.94■■□□□ 1.9
Hfm1D3Z4R1 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Hfm1D3Z4R1 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Hfm1D3Z4R1 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Hfm1D3Z4R1 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Hfm1D3Z4R1 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Hfm1D3Z4R1 Gm6433-201ENSMUST00000118634 875 ntBASIC26.93■■□□□ 1.9
Hfm1D3Z4R1 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
Hfm1D3Z4R1 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Hfm1D3Z4R1 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC26.93■■□□□ 1.9
Hfm1D3Z4R1 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC26.93■■□□□ 1.9
Hfm1D3Z4R1 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
Hfm1D3Z4R1 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Hfm1D3Z4R1 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Hfm1D3Z4R1 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Hfm1D3Z4R1 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
Hfm1D3Z4R1 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Hfm1D3Z4R1 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Hfm1D3Z4R1 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Hfm1D3Z4R1 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC26.91■■□□□ 1.9
Hfm1D3Z4R1 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Hfm1D3Z4R1 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Hfm1D3Z4R1 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Hfm1D3Z4R1 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
Hfm1D3Z4R1 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Hfm1D3Z4R1 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC26.91■■□□□ 1.9
Hfm1D3Z4R1 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Hfm1D3Z4R1 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
Hfm1D3Z4R1 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
Hfm1D3Z4R1 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC26.9■■□□□ 1.9
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms