Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Syce3B5KM66 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Syce3B5KM66 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Syce3B5KM66 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Syce3B5KM66 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Syce3B5KM66 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Syce3B5KM66 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.71■■□□□ 1.07
Syce3B5KM66 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.71■■□□□ 1.07
Syce3B5KM66 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.71■■□□□ 1.07
Syce3B5KM66 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Syce3B5KM66 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Syce3B5KM66 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Syce3B5KM66 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Syce3B5KM66 Gm37811-201ENSMUST00000192416 2601 ntBASIC21.7■■□□□ 1.06
Syce3B5KM66 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Syce3B5KM66 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Syce3B5KM66 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Syce3B5KM66 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Syce3B5KM66 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC21.7■■□□□ 1.06
Syce3B5KM66 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Syce3B5KM66 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Syce3B5KM66 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Syce3B5KM66 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Syce3B5KM66 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Syce3B5KM66 Cap2-205ENSMUST00000225824 1634 ntBASIC21.69■■□□□ 1.06
Syce3B5KM66 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Syce3B5KM66 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Syce3B5KM66 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Syce3B5KM66 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC21.69■■□□□ 1.06
Syce3B5KM66 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.69■■□□□ 1.06
Syce3B5KM66 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Syce3B5KM66 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Syce3B5KM66 AC123834.2-201ENSMUST00000224038 2340 ntBASIC21.68■■□□□ 1.06
Syce3B5KM66 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Syce3B5KM66 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Syce3B5KM66 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Syce3B5KM66 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Syce3B5KM66 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Syce3B5KM66 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.67■■□□□ 1.06
Syce3B5KM66 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Syce3B5KM66 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Syce3B5KM66 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Syce3B5KM66 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Syce3B5KM66 Gm42922-201ENSMUST00000195887 2078 ntBASIC21.67■■□□□ 1.06
Syce3B5KM66 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC21.66■■□□□ 1.06
Syce3B5KM66 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Syce3B5KM66 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Syce3B5KM66 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Syce3B5KM66 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Syce3B5KM66 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC21.66■■□□□ 1.06
Syce3B5KM66 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Syce3B5KM66 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Syce3B5KM66 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Syce3B5KM66 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Syce3B5KM66 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Syce3B5KM66 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Syce3B5KM66 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Syce3B5KM66 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Syce3B5KM66 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Syce3B5KM66 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Syce3B5KM66 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Syce3B5KM66 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC21.66■■□□□ 1.06
Syce3B5KM66 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Syce3B5KM66 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Syce3B5KM66 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Syce3B5KM66 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
Syce3B5KM66 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Syce3B5KM66 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Syce3B5KM66 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
Syce3B5KM66 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Syce3B5KM66 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Syce3B5KM66 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC21.65■■□□□ 1.06
Syce3B5KM66 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Syce3B5KM66 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Syce3B5KM66 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Syce3B5KM66 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Syce3B5KM66 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Syce3B5KM66 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Syce3B5KM66 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Syce3B5KM66 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Syce3B5KM66 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Syce3B5KM66 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Syce3B5KM66 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Syce3B5KM66 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.05
Syce3B5KM66 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Syce3B5KM66 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Syce3B5KM66 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Syce3B5KM66 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Syce3B5KM66 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.05
Syce3B5KM66 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Syce3B5KM66 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Syce3B5KM66 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Syce3B5KM66 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Syce3B5KM66 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.63■■□□□ 1.05
Syce3B5KM66 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Syce3B5KM66 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Syce3B5KM66 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Syce3B5KM66 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Syce3B5KM66 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Syce3B5KM66 Gm42911-201ENSMUST00000199360 1630 ntBASIC21.62■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms