Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sh2d4bA6X942 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Sh2d4bA6X942 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sh2d4bA6X942 Gm13168-201ENSMUST00000121771 632 ntBASIC20.26■□□□□ 0.83
Sh2d4bA6X942 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Sh2d4bA6X942 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.26■□□□□ 0.83
Sh2d4bA6X942 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Sh2d4bA6X942 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.26■□□□□ 0.83
Sh2d4bA6X942 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sh2d4bA6X942 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sh2d4bA6X942 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sh2d4bA6X942 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Sh2d4bA6X942 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Sh2d4bA6X942 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sh2d4bA6X942 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sh2d4bA6X942 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sh2d4bA6X942 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sh2d4bA6X942 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sh2d4bA6X942 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Sh2d4bA6X942 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sh2d4bA6X942 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sh2d4bA6X942 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sh2d4bA6X942 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sh2d4bA6X942 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Sh2d4bA6X942 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Sh2d4bA6X942 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Sh2d4bA6X942 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.25■□□□□ 0.83
Sh2d4bA6X942 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sh2d4bA6X942 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sh2d4bA6X942 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Sh2d4bA6X942 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sh2d4bA6X942 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sh2d4bA6X942 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sh2d4bA6X942 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sh2d4bA6X942 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sh2d4bA6X942 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.24■□□□□ 0.83
Sh2d4bA6X942 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.24■□□□□ 0.83
Sh2d4bA6X942 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sh2d4bA6X942 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Sh2d4bA6X942 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.24■□□□□ 0.83
Sh2d4bA6X942 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sh2d4bA6X942 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sh2d4bA6X942 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.24■□□□□ 0.83
Sh2d4bA6X942 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Sh2d4bA6X942 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sh2d4bA6X942 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Sh2d4bA6X942 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sh2d4bA6X942 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sh2d4bA6X942 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.24■□□□□ 0.83
Sh2d4bA6X942 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sh2d4bA6X942 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sh2d4bA6X942 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sh2d4bA6X942 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.23■□□□□ 0.83
Sh2d4bA6X942 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sh2d4bA6X942 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sh2d4bA6X942 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Sh2d4bA6X942 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.23■□□□□ 0.83
Sh2d4bA6X942 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Sh2d4bA6X942 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.23■□□□□ 0.83
Sh2d4bA6X942 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sh2d4bA6X942 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sh2d4bA6X942 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.23■□□□□ 0.83
Sh2d4bA6X942 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sh2d4bA6X942 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sh2d4bA6X942 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sh2d4bA6X942 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sh2d4bA6X942 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sh2d4bA6X942 Gm10812-201ENSMUST00000099864 546 ntBASIC20.22■□□□□ 0.83
Sh2d4bA6X942 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sh2d4bA6X942 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC20.22■□□□□ 0.83
Sh2d4bA6X942 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sh2d4bA6X942 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sh2d4bA6X942 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Sh2d4bA6X942 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Sh2d4bA6X942 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Sh2d4bA6X942 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Sh2d4bA6X942 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.21■□□□□ 0.83
Sh2d4bA6X942 Gm13148-201ENSMUST00000118892 745 ntBASIC20.21■□□□□ 0.83
Sh2d4bA6X942 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.21■□□□□ 0.83
Sh2d4bA6X942 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.21■□□□□ 0.83
Sh2d4bA6X942 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sh2d4bA6X942 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sh2d4bA6X942 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sh2d4bA6X942 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sh2d4bA6X942 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Sh2d4bA6X942 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sh2d4bA6X942 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Sh2d4bA6X942 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sh2d4bA6X942 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.83
Sh2d4bA6X942 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sh2d4bA6X942 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Sh2d4bA6X942 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sh2d4bA6X942 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Sh2d4bA6X942 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sh2d4bA6X942 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sh2d4bA6X942 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Sh2d4bA6X942 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sh2d4bA6X942 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sh2d4bA6X942 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Sh2d4bA6X942 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms