Protein–RNA interactions for Protein: A6H6S0

Herc3, Hect domain and RLD 3, mousemouse

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc3A6H6S0 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Herc3A6H6S0 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC21■□□□□ 0.95
Herc3A6H6S0 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Herc3A6H6S0 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Herc3A6H6S0 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC21■□□□□ 0.95
Herc3A6H6S0 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC21■□□□□ 0.95
Herc3A6H6S0 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC21■□□□□ 0.95
Herc3A6H6S0 Gm21168-201ENSMUST00000199646 1096 ntBASIC21■□□□□ 0.95
Herc3A6H6S0 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC21■□□□□ 0.95
Herc3A6H6S0 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Herc3A6H6S0 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Herc3A6H6S0 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Herc3A6H6S0 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC21■□□□□ 0.95
Herc3A6H6S0 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Herc3A6H6S0 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Herc3A6H6S0 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Herc3A6H6S0 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Herc3A6H6S0 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Herc3A6H6S0 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Herc3A6H6S0 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Herc3A6H6S0 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Herc3A6H6S0 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Herc3A6H6S0 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Herc3A6H6S0 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.99■□□□□ 0.95
Herc3A6H6S0 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.99■□□□□ 0.95
Herc3A6H6S0 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.99■□□□□ 0.95
Herc3A6H6S0 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Herc3A6H6S0 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Herc3A6H6S0 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Herc3A6H6S0 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Herc3A6H6S0 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Herc3A6H6S0 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Herc3A6H6S0 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Herc3A6H6S0 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Herc3A6H6S0 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Herc3A6H6S0 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Herc3A6H6S0 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Herc3A6H6S0 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.98■□□□□ 0.95
Herc3A6H6S0 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Herc3A6H6S0 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.98■□□□□ 0.95
Herc3A6H6S0 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Herc3A6H6S0 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Herc3A6H6S0 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Herc3A6H6S0 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Herc3A6H6S0 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Herc3A6H6S0 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Herc3A6H6S0 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Herc3A6H6S0 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Herc3A6H6S0 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Herc3A6H6S0 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Herc3A6H6S0 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Herc3A6H6S0 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Herc3A6H6S0 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Herc3A6H6S0 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Herc3A6H6S0 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.97■□□□□ 0.95
Herc3A6H6S0 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Herc3A6H6S0 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Herc3A6H6S0 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.97■□□□□ 0.95
Herc3A6H6S0 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Herc3A6H6S0 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Herc3A6H6S0 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.97■□□□□ 0.95
Herc3A6H6S0 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Herc3A6H6S0 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Herc3A6H6S0 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.96■□□□□ 0.95
Herc3A6H6S0 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Herc3A6H6S0 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Herc3A6H6S0 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Herc3A6H6S0 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Herc3A6H6S0 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Herc3A6H6S0 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Herc3A6H6S0 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Herc3A6H6S0 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Herc3A6H6S0 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Herc3A6H6S0 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Herc3A6H6S0 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Herc3A6H6S0 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Herc3A6H6S0 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Herc3A6H6S0 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Herc3A6H6S0 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Herc3A6H6S0 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Herc3A6H6S0 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Herc3A6H6S0 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Herc3A6H6S0 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.95■□□□□ 0.94
Herc3A6H6S0 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
Herc3A6H6S0 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Herc3A6H6S0 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Herc3A6H6S0 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Herc3A6H6S0 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Herc3A6H6S0 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Herc3A6H6S0 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Herc3A6H6S0 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Herc3A6H6S0 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Herc3A6H6S0 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Herc3A6H6S0 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Herc3A6H6S0 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
Herc3A6H6S0 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Herc3A6H6S0 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.94■□□□□ 0.94
Herc3A6H6S0 Gm38205-201ENSMUST00000192243 258 ntBASIC20.94■□□□□ 0.94
Herc3A6H6S0 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Herc3A6H6S0 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms