Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Odf3b-204ENSMUST00000227834 930 ntBASIC10.19□□□□□ -0.78
Ubr4A2AN08 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ubr4A2AN08 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ubr4A2AN08 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ubr4A2AN08 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ubr4A2AN08 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Ubr4A2AN08 Gm11594-201ENSMUST00000122313 162 ntBASIC10.19□□□□□ -0.78
Ubr4A2AN08 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Ubr4A2AN08 Gm17807-201ENSMUST00000186869 298 ntBASIC10.18□□□□□ -0.78
Ubr4A2AN08 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC10.18□□□□□ -0.78
Ubr4A2AN08 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ubr4A2AN08 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ubr4A2AN08 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ubr4A2AN08 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ubr4A2AN08 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ubr4A2AN08 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Ubr4A2AN08 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ubr4A2AN08 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ubr4A2AN08 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ubr4A2AN08 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Ubr4A2AN08 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ubr4A2AN08 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ubr4A2AN08 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ubr4A2AN08 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC10.18□□□□□ -0.78
Ubr4A2AN08 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ubr4A2AN08 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC10.18□□□□□ -0.78
Ubr4A2AN08 Gm3375-201ENSMUST00000203929 796 ntBASIC10.18□□□□□ -0.78
Ubr4A2AN08 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ubr4A2AN08 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ubr4A2AN08 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Ubr4A2AN08 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC10.17□□□□□ -0.78
Ubr4A2AN08 Gm18959-201ENSMUST00000208954 655 ntBASIC10.17□□□□□ -0.78
Ubr4A2AN08 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ubr4A2AN08 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ubr4A2AN08 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ubr4A2AN08 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ubr4A2AN08 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ubr4A2AN08 Spr-ps1-201ENSMUST00000089584 605 ntBASIC10.17□□□□□ -0.78
Ubr4A2AN08 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Ubr4A2AN08 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ubr4A2AN08 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ubr4A2AN08 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ubr4A2AN08 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Ubr4A2AN08 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ubr4A2AN08 AC159093.1-201ENSMUST00000227779 380 ntBASIC10.17□□□□□ -0.78
Ubr4A2AN08 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Ubr4A2AN08 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ubr4A2AN08 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC10.16□□□□□ -0.78
Ubr4A2AN08 AC134329.2-201ENSMUST00000217897 428 ntBASIC10.16□□□□□ -0.78
Ubr4A2AN08 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC10.16□□□□□ -0.78
Ubr4A2AN08 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ubr4A2AN08 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ubr4A2AN08 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC10.16□□□□□ -0.78
Ubr4A2AN08 Gm13127-201ENSMUST00000118978 1389 ntBASIC10.16□□□□□ -0.78
Ubr4A2AN08 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ubr4A2AN08 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ubr4A2AN08 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC10.16□□□□□ -0.78
Ubr4A2AN08 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ubr4A2AN08 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ubr4A2AN08 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC10.16□□□□□ -0.78
Ubr4A2AN08 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ubr4A2AN08 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ubr4A2AN08 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ubr4A2AN08 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ubr4A2AN08 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ubr4A2AN08 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ubr4A2AN08 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ubr4A2AN08 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ubr4A2AN08 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Ubr4A2AN08 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Ubr4A2AN08 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.79
Ubr4A2AN08 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Ubr4A2AN08 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Ubr4A2AN08 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC10.14□□□□□ -0.79
Ubr4A2AN08 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Ubr4A2AN08 Gm15165-201ENSMUST00000118140 502 ntBASIC10.14□□□□□ -0.79
Ubr4A2AN08 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Ubr4A2AN08 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ubr4A2AN08 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ubr4A2AN08 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Ubr4A2AN08 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ubr4A2AN08 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Ubr4A2AN08 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Ubr4A2AN08 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ubr4A2AN08 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Ubr4A2AN08 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Ubr4A2AN08 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC10.13□□□□□ -0.79
Ubr4A2AN08 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Ubr4A2AN08 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Ubr4A2AN08 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC10.13□□□□□ -0.79
Ubr4A2AN08 AC131586.3-201ENSMUST00000228355 1367 ntBASIC10.13□□□□□ -0.79
Ubr4A2AN08 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ubr4A2AN08 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC10.13□□□□□ -0.79
Ubr4A2AN08 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC10.13□□□□□ -0.79
Ubr4A2AN08 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Ubr4A2AN08 Gm18206-201ENSMUST00000207027 926 ntBASIC10.13□□□□□ -0.79
Ubr4A2AN08 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC10.13□□□□□ -0.79
Ubr4A2AN08 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Ubr4A2AN08 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ubr4A2AN08 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms